RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W PAM18Q07914 168 aa1.64□□□□□ -2.15
SMD1YGR074W SOD1P00445 154 aaKnown RBP1.63□□□□□ -2.15
SMD1YGR074W RPL4AP10664 362 aaKnown RBP1.63□□□□□ -2.15
SMD1YGR074W PHO80P20052 293 aa1.63□□□□□ -2.15
SMD1YGR074W COX10P21592 462 aa1.63□□□□□ -2.15
SMD1YGR074W RNA15P25299 296 aaPredicted RBP1.63□□□□□ -2.15
SMD1YGR074W YCR016WP25617 290 aaKnown RBP1.63□□□□□ -2.15
SMD1YGR074W CWP1P28319 239 aa1.63□□□□□ -2.15
SMD1YGR074W PRS4P38063 326 aaPredicted RBP1.63□□□□□ -2.15
SMD1YGR074W POP8P38208 133 aa1.63□□□□□ -2.15
SMD1YGR074W PRS2P38620 318 aaKnown RBP1.63□□□□□ -2.15
SMD1YGR074W YHI9P38765 294 aa1.63□□□□□ -2.15
SMD1YGR074W TRR2P38816 342 aa1.63□□□□□ -2.15
SMD1YGR074W AVT7P40501 490 aa1.63□□□□□ -2.15
SMD1YGR074W AGX1P43567 385 aa1.63□□□□□ -2.15
SMD1YGR074W RPL4BP49626 362 aaKnown RBP1.63□□□□□ -2.15
SMD1YGR074W MAL13P53338 473 aa1.63□□□□□ -2.15
SMD1YGR074W SWT21P53873 357 aaPredicted RBP1.63□□□□□ -2.15
SMD1YGR074W YNL040WP53960 456 aaPredicted RBP1.63□□□□□ -2.15
SMD1YGR074W ASI3P53983 676 aa1.63□□□□□ -2.15
SMD1YGR074W EBS1Q03466 884 aaKnown RBP1.63□□□□□ -2.15
SMD1YGR074W ARV1Q06541 321 aa1.63□□□□□ -2.15
SMD1YGR074W YDL144CQ07589 356 aa1.63□□□□□ -2.15
SMD1YGR074W SDO1Q07953 250 aaKnown RBP1.63□□□□□ -2.15
SMD1YGR074W SME1Q12330 94 aaPredicted RBP1.63□□□□□ -2.15
SMD1YGR074W IES3Q12345 250 aa1.63□□□□□ -2.15
SMD1YGR074W SNU23Q12368 194 aaPredicted RBP1.63□□□□□ -2.15
SMD1YGR074W YPL119C-AQ3E751 87 aa1.63□□□□□ -2.15
SMD1YGR074W YBL111CQ3E7Y5 667 aa1.63□□□□□ -2.15
SMD1YGR074W YOL085CQ99345 113 aa1.63□□□□□ -2.15
SMD1YGR074W YEL009C-AA0A023PZF2 135 aa1.62□□□□□ -2.15
SMD1YGR074W MSN4P33749 630 aa1.62□□□□□ -2.15
SMD1YGR074W AST1P35183 429 aa1.62□□□□□ -2.15
SMD1YGR074W FZO1P38297 855 aa1.62□□□□□ -2.15
SMD1YGR074W HST4P53688 370 aa1.62□□□□□ -2.15
SMD1YGR074W SRL4Q03085 281 aa1.62□□□□□ -2.15
SMD1YGR074W KRE28Q04431 385 aa1.62□□□□□ -2.15
SMD1YGR074W DIB1Q06819 143 aaPredicted RBP1.62□□□□□ -2.15
SMD1YGR074W RRS1Q08746 203 aaKnown RBP1.62□□□□□ -2.15
SMD1YGR074W TY3A-GQ12173 290 aa1.62□□□□□ -2.15
SMD1YGR074W YOR029WQ12243 111 aa1.62□□□□□ -2.15
SMD1YGR074W TY3A-IQ99219 290 aa1.62□□□□□ -2.15
SMD1YGR074W AI5_BETAQ9ZZX0 354 aa1.62□□□□□ -2.15
SMD1YGR074W NUP157P40064 1391 aaKnown RBP1.61□□□□□ -2.15
SMD1YGR074W POX1P13711 748 aa1.61□□□□□ -2.15
SMD1YGR074W YAK1P14680 807 aa1.61□□□□□ -2.15
SMD1YGR074W QRI5P32344 111 aa1.61□□□□□ -2.15
SMD1YGR074W ERG2P32352 222 aa1.61□□□□□ -2.15
SMD1YGR074W IME2P32581 645 aa1.61□□□□□ -2.15
SMD1YGR074W RPT5P33297 434 aaKnown RBP1.61□□□□□ -2.15
SMD1YGR074W SGE1P33335 543 aa1.61□□□□□ -2.15
SMD1YGR074W HEK2P38199 381 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SMD1YGR074W MED8P38304 223 aa1.61□□□□□ -2.15
SMD1YGR074W ATG12P38316 186 aa1.61□□□□□ -2.15
SMD1YGR074W THO1P40040 218 aaKnown RBP1.61□□□□□ -2.15
SMD1YGR074W SYS1P41544 203 aa1.61□□□□□ -2.15
SMD1YGR074W ECO1P43605 281 aa1.61□□□□□ -2.15
SMD1YGR074W BUD13P46947 266 aaPredicted RBP1.61□□□□□ -2.15
SMD1YGR074W USE1P53146 245 aa1.61□□□□□ -2.15
SMD1YGR074W SMD1Q02260 146 aaPredicted RBP1.61□□□□□ -2.15
SMD1YGR074W CWC21Q03375 135 aaKnown RBP1.61□□□□□ -2.15
SMD1YGR074W RNH1Q04740 348 aa1.61□□□□□ -2.15
SMD1YGR074W BOP2Q06150 570 aa1.61□□□□□ -2.15
SMD1YGR074W ATG17Q06410 417 aa1.61□□□□□ -2.15
SMD1YGR074W PIN3Q06449 215 aa1.61□□□□□ -2.15
SMD1YGR074W MSH5Q12175 901 aa1.61□□□□□ -2.15
SMD1YGR074W CFT1Q06632 1357 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W CDC42P19073 191 aa1.6□□□□□ -2.15
SMD1YGR074W YCR025CP25352 136 aa1.6□□□□□ -2.15
SMD1YGR074W RPB9P27999 122 aa1.6□□□□□ -2.15
SMD1YGR074W BMH1P29311 267 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W NTG1P31378 399 aa1.6□□□□□ -2.15
SMD1YGR074W ARO4P32449 370 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W BMH2P34730 273 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W JEN1P36035 616 aa1.6□□□□□ -2.15
SMD1YGR074W MRPL39P36533 70 aa1.6□□□□□ -2.15
SMD1YGR074W MRX3P38172 270 aa1.6□□□□□ -2.15
SMD1YGR074W SSH1P38353 490 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W YHL044WP38727 235 aa1.6□□□□□ -2.15
SMD1YGR074W SER33P40510 469 aa1.6□□□□□ -2.15
SMD1YGR074W YIL059CP40520 121 aa1.6□□□□□ -2.15
SMD1YGR074W DSN1P40568 576 aa1.6□□□□□ -2.15
SMD1YGR074W NIF3P53081 288 aa1.6□□□□□ -2.15
SMD1YGR074W FMP41P53889 259 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W YNL095CP53932 642 aa1.6□□□□□ -2.15
SMD1YGR074W SWS2P53937 143 aa1.6□□□□□ -2.15
SMD1YGR074W ACT1P60010 375 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W RHO3Q00245 231 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W TVP15Q03860 143 aa1.6□□□□□ -2.15
SMD1YGR074W YPR098CQ06089 161 aa1.6□□□□□ -2.15
SMD1YGR074W DXO1Q06349 442 aa1.6□□□□□ -2.15
SMD1YGR074W SLD7Q08457 257 aa1.6□□□□□ -2.15
SMD1YGR074W CSM4Q08955 156 aa1.6□□□□□ -2.15
SMD1YGR074W YPR063CQ12160 140 aa1.6□□□□□ -2.15
SMD1YGR074W ATG31Q12421 196 aa1.6□□□□□ -2.15
SMD1YGR074W YAL063C-AQ3E791 96 aa1.6□□□□□ -2.15
SMD1YGR074W FKS1P38631 1876 aaKnown RBP1.6□□□□□ -2.15
SMD1YGR074W RPP0P05317 312 aaKnown RBP1.59□□□□□ -2.15
SMD1YGR074W YOL163WP0CF20 169 aa1.59□□□□□ -2.15
SMD1YGR074W RPL24BP24000 155 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms