RNA–Protein interactions for RNA: YFR021W

ATG18, Transcript of Phosphoinositide binding protein, yeast

Gene ATG18, Length 1,503 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG18	YFR021W	PAN6	P40459	309 aa		4.72	□□□□□ -1.65
ATG18	YFR021W	NBP35	P52920	328 aa		4.72	□□□□□ -1.65
ATG18	YFR021W	YGR015C	P53208	328 aa		4.72	□□□□□ -1.65
ATG18	YFR021W	NRM1	P53718	249 aa		4.72	□□□□□ -1.65
ATG18	YFR021W	IRC25	Q07951	179 aa		4.72	□□□□□ -1.65
ATG18	YFR021W	RAD9	P14737	1309 aa		4.71	□□□□□ -1.65
ATG18	YFR021W	RPL27A	P0C2H6	136 aa	Known RBP	4.71	□□□□□ -1.66
ATG18	YFR021W	RPL27B	P0C2H7	136 aa	Known RBP	4.71	□□□□□ -1.66
ATG18	YFR021W	EHD3	P28817	500 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	YBL059W	P34224	193 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	SHE1	P38200	338 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	YBR096W	P38256	230 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	CUE1	P38428	203 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	SDS23	P53172	527 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	CTF19	Q02732	369 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	ADD37	Q03233	198 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	YLR177W	Q06251	628 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	PLB3	Q08108	686 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	SNU23	Q12368	194 aa	Predicted RBP	4.71	□□□□□ -1.66
ATG18	YFR021W	YPL119C-A	Q3E751	87 aa		4.71	□□□□□ -1.66
ATG18	YFR021W	YDR157W	A0A023PZE8	133 aa		4.7	□□□□□ -1.66
ATG18	YFR021W	ADE1	P27616	306 aa		4.7	□□□□□ -1.66
ATG18	YFR021W	CDC13	P32797	924 aa	Known RBP	4.7	□□□□□ -1.66
ATG18	YFR021W	RFS1	P38234	210 aa	Known RBP	4.7	□□□□□ -1.66
ATG18	YFR021W	LOA1	Q06508	300 aa		4.7	□□□□□ -1.66
ATG18	YFR021W	ABP140	Q08641	628 aa	Known RBP	4.7	□□□□□ -1.66
ATG18	YFR021W	VIK1	Q12045	647 aa		4.7	□□□□□ -1.66
ATG18	YFR021W	SPT15	P13393	240 aa	Known RBP	4.69	□□□□□ -1.66
ATG18	YFR021W	ARO2	P28777	376 aa	Known RBP	4.69	□□□□□ -1.66
ATG18	YFR021W	MBA1	P38300	278 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	MIC26	P50087	233 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	RMR1	P53060	241 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	THO2	P53552	1597 aa	Known RBP	4.69	□□□□□ -1.66
ATG18	YFR021W	YMR166C	Q03829	368 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	YDR222W	Q04925	415 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	YPR098C	Q06089	161 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	YOR292C	Q08743	309 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	TIP41	Q12199	356 aa		4.69	□□□□□ -1.66
ATG18	YFR021W	REV3	P14284	1504 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	HTB1	P02293	131 aa	Known RBP	4.68	□□□□□ -1.66
ATG18	YFR021W	HTB2	P02294	131 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	ATG15	P25641	520 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
ATG18	YFR021W	PRX1	P34227	261 aa	Known RBP	4.68	□□□□□ -1.66
ATG18	YFR021W	YKL075C	P36083	450 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	MED8	P38304	223 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	BAT1	P38891	393 aa	Known RBP	4.68	□□□□□ -1.66
ATG18	YFR021W	OXA1	P39952	402 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	PRE6	P40303	254 aa	Known RBP	4.68	□□□□□ -1.66
ATG18	YFR021W	NOP19	P53317	196 aa	Predicted RBP	4.68	□□□□□ -1.66
ATG18	YFR021W	YOR376W	Q08900	122 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	SRO7	Q12038	1033 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	YCL012C	Q8J0M4	134 aa		4.68	□□□□□ -1.66
ATG18	YFR021W	CDC10	P25342	322 aa	Known RBP	4.67	□□□□□ -1.66
ATG18	YFR021W	MRP21	P38175	177 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	MGA1	P53050	456 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	YET2	Q04210	160 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	YMR114C	Q04471	368 aa	Known RBP	4.67	□□□□□ -1.66
ATG18	YFR021W	YMR317W	Q04893	1140 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	ARC18	Q05933	178 aa	Known RBP	4.67	□□□□□ -1.66
ATG18	YFR021W	CMC2	Q3E7A4	109 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	BGL2	P15703	313 aa	Known RBP	4.67	□□□□□ -1.66
ATG18	YFR021W	AAT2	P23542	418 aa	Known RBP	4.67	□□□□□ -1.66
ATG18	YFR021W	NTF2	P33331	125 aa	Known RBP	4.67	□□□□□ -1.66
ATG18	YFR021W	FZO1	P38297	855 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	TIM17	P39515	158 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	GET1	P53192	235 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	COG7	P53195	279 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	RNH201	P53942	307 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	SDC1	Q03323	175 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	RRS1	Q08746	203 aa	Known RBP	4.67	□□□□□ -1.66
ATG18	YFR021W	MMT2	Q08970	484 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	DCN1	Q12395	269 aa		4.67	□□□□□ -1.66
ATG18	YFR021W	SIN3	P22579	1536 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	RFA3	P26755	122 aa	Known RBP	4.66	□□□□□ -1.66
ATG18	YFR021W	SSO1	P32867	290 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	SOL2	P37262	315 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	GOS1	P38736	223 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	EGD2	P38879	174 aa	Known RBP	4.66	□□□□□ -1.66
ATG18	YFR021W	STB1	P42845	420 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	NIF3	P53081	288 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	RHO3	Q00245	231 aa	Known RBP	4.66	□□□□□ -1.66
ATG18	YFR021W	ATG17	Q06410	417 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	COQ10	Q08058	207 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	NDD1	Q08887	554 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	RFM1	Q12192	310 aa		4.66	□□□□□ -1.66
ATG18	YFR021W	SSK2	P53599	1579 aa		4.65	□□□□□ -1.67
ATG18	YFR021W	ATP7	P30902	174 aa		4.65	□□□□□ -1.67
ATG18	YFR021W	FRM2	P37261	193 aa		4.65	□□□□□ -1.67
ATG18	YFR021W	EFM1	P38732	585 aa		4.65	□□□□□ -1.67
ATG18	YFR021W	WSC4	P38739	605 aa		4.65	□□□□□ -1.67
ATG18	YFR021W	IKI1	P38874	309 aa		4.65	□□□□□ -1.67
ATG18	YFR021W	ADO1	P47143	340 aa	Known RBP	4.65	□□□□□ -1.67
ATG18	YFR021W	JLP1	Q12358	412 aa		4.65	□□□□□ -1.67
ATG18	YFR021W	RPL21B	Q12672	160 aa	Known RBP	4.65	□□□□□ -1.67
ATG18	YFR021W	QCR7	P00128	127 aa		4.64	□□□□□ -1.67
ATG18	YFR021W	ASP3-2	P0CX77	362 aa		4.64	□□□□□ -1.67
ATG18	YFR021W	ASP3-3	P0CX78	362 aa		4.64	□□□□□ -1.67
ATG18	YFR021W	ASP3-4	P0CX79	362 aa		4.64	□□□□□ -1.67
ATG18	YFR021W	ASP3-1	P0CZ17	362 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 167 ms