RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W CLP1Q08685 445 aaPredicted RBP1.85□□□□□ -2.11
NIC96YFR002W MSH5Q12175 901 aa1.85□□□□□ -2.11
NIC96YFR002W RHO1P06780 209 aaKnown RBP1.84□□□□□ -2.11
NIC96YFR002W RPL31AP0C2H8 113 aaKnown RBP1.84□□□□□ -2.11
NIC96YFR002W YKL071WP36086 256 aa1.84□□□□□ -2.11
NIC96YFR002W SWD2P36104 329 aaPredicted RBP1.84□□□□□ -2.11
NIC96YFR002W AIM29P36154 155 aa1.84□□□□□ -2.11
NIC96YFR002W LDB7P38210 180 aa1.84□□□□□ -2.11
NIC96YFR002W RCK2P38623 610 aa1.84□□□□□ -2.11
NIC96YFR002W TIM17P39515 158 aa1.84□□□□□ -2.11
NIC96YFR002W MAM33P40513 266 aa1.84□□□□□ -2.11
NIC96YFR002W GDS1P41913 522 aa1.84□□□□□ -2.11
NIC96YFR002W GIM3P53900 129 aa1.84□□□□□ -2.11
NIC96YFR002W OST6Q03723 332 aa1.84□□□□□ -2.11
NIC96YFR002W GTO3Q04806 366 aa1.84□□□□□ -2.11
NIC96YFR002W SMD2Q06217 110 aaKnown RBP1.84□□□□□ -2.11
NIC96YFR002W LOT6Q07923 191 aa1.84□□□□□ -2.11
NIC96YFR002W YLR422WQ06409 1932 aa1.84□□□□□ -2.11
NIC96YFR002W VPS1P21576 704 aaKnown RBP1.84□□□□□ -2.12
NIC96YFR002W RBK1P25332 333 aa1.84□□□□□ -2.12
NIC96YFR002W ZIP1P31111 875 aa1.84□□□□□ -2.12
NIC96YFR002W ZRT1P32804 376 aa1.84□□□□□ -2.12
NIC96YFR002W MRPL6P32904 214 aa1.84□□□□□ -2.12
NIC96YFR002W PFS1P38872 237 aa1.84□□□□□ -2.12
NIC96YFR002W FHL1P39521 936 aa1.84□□□□□ -2.12
NIC96YFR002W CGR1P53188 120 aa1.84□□□□□ -2.12
NIC96YFR002W CLD1P53264 445 aa1.84□□□□□ -2.12
NIC96YFR002W TRM112P53738 135 aaPredicted RBP1.84□□□□□ -2.12
NIC96YFR002W SKI8Q02793 397 aaPredicted RBP1.84□□□□□ -2.12
NIC96YFR002W ADH6Q04894 360 aaKnown RBP1.84□□□□□ -2.12
NIC96YFR002W ERP3Q12403 225 aa1.84□□□□□ -2.12
NIC96YFR002W TOM1Q03280 3268 aa1.83□□□□□ -2.12
NIC96YFR002W REP1P03871 373 aa1.83□□□□□ -2.12
NIC96YFR002W PIS1P06197 220 aaKnown RBP1.83□□□□□ -2.12
NIC96YFR002W SRB4P32569 687 aa1.83□□□□□ -2.12
NIC96YFR002W RPC37P36121 282 aa1.83□□□□□ -2.12
NIC96YFR002W YPC1P38298 316 aa1.83□□□□□ -2.12
NIC96YFR002W YHL026CP38740 315 aa1.83□□□□□ -2.12
NIC96YFR002W YHR035WP38769 630 aa1.83□□□□□ -2.12
NIC96YFR002W RTC3P38804 111 aaPredicted RBP1.83□□□□□ -2.12
NIC96YFR002W HMF1P40037 129 aaKnown RBP1.83□□□□□ -2.12
NIC96YFR002W CIN2P46670 268 aa1.83□□□□□ -2.12
NIC96YFR002W SLT2Q00772 484 aa1.83□□□□□ -2.12
NIC96YFR002W YPL077CQ02831 240 aa1.83□□□□□ -2.12
NIC96YFR002W ASR1Q06834 288 aa1.83□□□□□ -2.12
NIC96YFR002W YLR012CQ07927 99 aa1.83□□□□□ -2.12
NIC96YFR002W YOS9Q99220 542 aa1.83□□□□□ -2.12
NIC96YFR002W FUS3P16892 353 aaKnown RBP1.83□□□□□ -2.12
NIC96YFR002W RPO26P20435 155 aa1.83□□□□□ -2.12
NIC96YFR002W DAL82P21705 255 aa1.83□□□□□ -2.12
NIC96YFR002W APA2P22108 325 aa1.83□□□□□ -2.12
NIC96YFR002W PBN1P25580 416 aa1.83□□□□□ -2.12
NIC96YFR002W ITR2P30606 609 aa1.83□□□□□ -2.12
NIC96YFR002W SPO23P33757 523 aa1.83□□□□□ -2.12
NIC96YFR002W MRPL27P36526 146 aaPredicted RBP1.83□□□□□ -2.12
NIC96YFR002W NPT1P39683 429 aaKnown RBP1.83□□□□□ -2.12
NIC96YFR002W PMT4P46971 762 aa1.83□□□□□ -2.12
NIC96YFR002W HAM1P47119 197 aaKnown RBP1.83□□□□□ -2.12
NIC96YFR002W NBP1P52919 319 aaPredicted RBP1.83□□□□□ -2.12
NIC96YFR002W CDH1P53197 566 aa1.83□□□□□ -2.12
NIC96YFR002W ALG11P53954 548 aaKnown RBP1.83□□□□□ -2.12
NIC96YFR002W YNL040WP53960 456 aaPredicted RBP1.83□□□□□ -2.12
NIC96YFR002W TRM82Q03774 444 aa1.83□□□□□ -2.12
NIC96YFR002W DDC1Q08949 612 aa1.83□□□□□ -2.12
NIC96YFR002W FRE8Q12209 686 aa1.83□□□□□ -2.12
NIC96YFR002W TCP1P12612 559 aaKnown RBP1.82□□□□□ -2.12
NIC96YFR002W SPS100P13130 326 aa1.82□□□□□ -2.12
NIC96YFR002W ZRC1P20107 442 aa1.82□□□□□ -2.12
NIC96YFR002W MEI5P32489 222 aa1.82□□□□□ -2.12
NIC96YFR002W YKL063CP35725 167 aa1.82□□□□□ -2.12
NIC96YFR002W MCH2P36032 473 aa1.82□□□□□ -2.12
NIC96YFR002W GPI18P38211 433 aa1.82□□□□□ -2.12
NIC96YFR002W HEM14P40012 539 aa1.82□□□□□ -2.12
NIC96YFR002W HIT1P46973 164 aa1.82□□□□□ -2.12
NIC96YFR002W GLG2P47011 380 aa1.82□□□□□ -2.12
NIC96YFR002W SNX41Q04053 625 aa1.82□□□□□ -2.12
NIC96YFR002W POM33Q12164 279 aa1.82□□□□□ -2.12
NIC96YFR002W PPA2P28239 310 aa1.82□□□□□ -2.12
NIC96YFR002W FUN26P31381 517 aa1.82□□□□□ -2.12
NIC96YFR002W PMT2P31382 759 aa1.82□□□□□ -2.12
NIC96YFR002W ARC19P33204 171 aaKnown RBP1.82□□□□□ -2.12
NIC96YFR002W YKL187CP34231 750 aa1.82□□□□□ -2.12
NIC96YFR002W RIB1P38066 345 aa1.82□□□□□ -2.12
NIC96YFR002W MRX3P38172 270 aa1.82□□□□□ -2.12
NIC96YFR002W YER184CP39961 794 aa1.82□□□□□ -2.12
NIC96YFR002W DDI1P40087 428 aa1.82□□□□□ -2.12
NIC96YFR002W YNL208WP40159 199 aaKnown RBP1.82□□□□□ -2.12
NIC96YFR002W YGL262WP53054 175 aa1.82□□□□□ -2.12
NIC96YFR002W TPS1Q00764 495 aaKnown RBP1.82□□□□□ -2.12
NIC96YFR002W PRM6Q04705 352 aa1.82□□□□□ -2.12
NIC96YFR002W DCR2Q05924 578 aa1.82□□□□□ -2.12
NIC96YFR002W SPO77Q06134 477 aa1.82□□□□□ -2.12
NIC96YFR002W PIN3Q06449 215 aa1.82□□□□□ -2.12
NIC96YFR002W YPR091CQ06833 770 aa1.82□□□□□ -2.12
NIC96YFR002W RDL2Q08742 149 aaKnown RBP1.82□□□□□ -2.12
NIC96YFR002W TAF10Q12030 206 aa1.82□□□□□ -2.12
NIC96YFR002W SNF8Q12483 233 aa1.82□□□□□ -2.12
NIC96YFR002W HIS1P00498 297 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W RPS14AP06367 137 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W CDC33P07260 213 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms