RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A JLP1Q12358 412 aa2.45□□□□□ -2.02
YFL002W-AYFL002W-A RPS8AP0CX39 200 aaKnown RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A RPS8BP0CX40 200 aaKnown RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A NDT80P38830 627 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A COX14P39103 70 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A PEX22P39718 180 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A ERG13P54839 491 aaKnown RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A ESA1Q08649 445 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A TRP1P00912 224 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A TDA11P38854 504 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A SUR2P38992 349 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A COX15P40086 486 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A GMC1Q04399 608 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A YNG1Q08465 219 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A TIR4Q12218 487 aaPredicted RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A TPO4Q12256 659 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A RPS18AP0CX55 146 aaKnown RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A RPS18BP0CX56 146 aaPredicted RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A ASP3-2P0CX77 362 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A ASP3-3P0CX78 362 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A ASP3-4P0CX79 362 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A ASP3-1P0CZ17 362 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A CDC13P32797 924 aaKnown RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A YCR087C-AP37263 153 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A MCM22P47167 239 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A NUP57P48837 541 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A SHY1P53266 389 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A VPS60Q03390 229 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A ATP16Q12165 160 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A YLR460CP54007 376 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A THI7Q05998 598 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A YOL163WP0CF20 169 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A DBP7P36120 742 aaKnown RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A NAT2P37293 288 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A SHC1P39000 512 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A PAN6P40459 309 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A IRC18P47056 224 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A YGL034CP53186 121 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A YNR066CP53752 436 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A IBD2P53892 351 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A BRX1Q08235 291 aaKnown RBP2.44□□□□□ -2.02
YFL002W-AYFL002W-A PCL9Q12477 304 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A YPL119C-AQ3E751 87 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A BI3Q9ZZW7 517 aa2.44□□□□□ -2.02
YFL002W-AYFL002W-A PIS1P06197 220 aaKnown RBP2.43□□□□□ -2.02
YFL002W-AYFL002W-A COS2P0CX12 379 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A COS3P0CX13 379 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A COS4P43542 379 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A NSA1P53136 463 aaPredicted RBP2.43□□□□□ -2.02
YFL002W-AYFL002W-A YML018CQ03730 393 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A ARO80Q04052 950 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A SIR4P11978 1358 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A YHL049CP38722 271 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A YPR098CQ06089 161 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A YLR126CQ12288 251 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A SFM1Q12314 213 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A MRPL20P22354 195 aaPredicted RBP2.43□□□□□ -2.02
YFL002W-AYFL002W-A VPS51P36116 164 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A MED8P38304 223 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A YIA6P40556 373 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A YGL082WP53155 381 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A YML096WQ04489 525 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A DPB2P24482 689 aaPredicted RBP2.43□□□□□ -2.02
YFL002W-AYFL002W-A SPS18P32572 300 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A PRE6P40303 254 aaKnown RBP2.43□□□□□ -2.02
YFL002W-AYFL002W-A GAB1P41733 394 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A PET191Q02772 108 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A HNT3Q08702 217 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A YOR292CQ08743 309 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A PER33Q12144 273 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A ICT1Q12385 394 aa2.43□□□□□ -2.02
YFL002W-AYFL002W-A CTA1P15202 515 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A ERD1P16151 362 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A CDC50P25656 391 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A MOB2P43563 287 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A CPT1P17898 393 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A IFM1P25038 676 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A INO2P26798 304 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A MDM31P38880 579 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A KRE29P40026 464 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A YIL029CP40538 142 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A MRS2Q01926 470 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A FDH1Q08911 376 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A RPS24AP0CX31 135 aaKnown RBP2.42□□□□□ -2.02
YFL002W-AYFL002W-A RPS24BP0CX32 135 aaKnown RBP2.42□□□□□ -2.02
YFL002W-AYFL002W-A CUE1P38428 203 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A NRK1P53915 240 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A TAF9Q05027 157 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A MSA1Q08471 629 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A WTM1Q12363 437 aaKnown RBP2.42□□□□□ -2.02
YFL002W-AYFL002W-A YKR104WP0CE69 306 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A ERD2P18414 219 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A MCK1P21965 375 aaKnown RBP2.42□□□□□ -2.02
YFL002W-AYFL002W-A UBC8P28263 218 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A KTI12P34253 313 aaKnown RBP2.42□□□□□ -2.02
YFL002W-AYFL002W-A FRM2P37261 193 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A GRE3P38715 327 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YFL002W-AYFL002W-A EGT2P42835 1041 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A YJR054WP47114 497 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A PRP24P49960 444 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms