RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	POG1	P40473	351 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	PRM5	P40476	318 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	YFR057W	P43625	151 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	NBP35	P52920	328 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	TPC1	P53257	314 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	SSU72	P53538	206 aa	Predicted RBP	2.76	□□□□□ -1.97
SMT3	YDR510W	WSC2	P53832	503 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	RHO3	Q00245	231 aa	Known RBP	2.76	□□□□□ -1.97
SMT3	YDR510W	VPS60	Q03390	229 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	SCS7	Q03529	384 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	YML018C	Q03730	393 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	GAS2	Q06135	555 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	HEM25	Q07534	307 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	YLR126C	Q12288	251 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	BI3	Q9ZZW7	517 aa		2.76	□□□□□ -1.97
SMT3	YDR510W	STE7	P06784	515 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	BCY1	P07278	416 aa	Known RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	MSI1	P13712	422 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	URA10	P30402	227 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	GPX1	P36014	167 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	MED8	P38304	223 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	LSM12	P38828	187 aa	Known RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	PAN6	P40459	309 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	YFL067W	P43537	175 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	YJR085C	P47131	105 aa	Known RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	YJR141W	P47172	347 aa	Predicted RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	NUP57	P48837	541 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	TRM9	P49957	279 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	PRP24	P49960	444 aa	Known RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	CLD1	P53264	445 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	YIP3	P53633	176 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	NRM1	P53718	249 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	RTC4	P53850	401 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	RRP17	Q04031	235 aa	Predicted RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	FSH2	Q05015	223 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	RIF2	Q06208	395 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	MIM1	Q08176	113 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	RPN8	Q08723	338 aa	Known RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	YPL245W	Q12179	454 aa	Known RBP	2.75	□□□□□ -1.97
SMT3	YDR510W	MCT1	Q12283	360 aa		2.75	□□□□□ -1.97
SMT3	YDR510W	HHF1	P02309	103 aa	Known RBP	2.74	□□□□□ -1.97
SMT3	YDR510W	SPT3	P06844	337 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	CPR4	P25334	318 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	VPH2	P32341	215 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	CDC13	P32797	924 aa	Known RBP	2.74	□□□□□ -1.97
SMT3	YDR510W	SGE1	P33335	543 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
SMT3	YDR510W	FES1	P38260	290 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	GOS1	P38736	223 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	WSC4	P38739	605 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	PTI1	P39927	425 aa	Predicted RBP	2.74	□□□□□ -1.97
SMT3	YDR510W	YND1	P40009	630 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	XBP1	P40489	647 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	PCI8	P40512	444 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	YJL213W	P40896	331 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	EGT2	P42835	1041 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	COS10	P52924	374 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	SLX9	P53251	210 aa	Predicted RBP	2.74	□□□□□ -1.97
SMT3	YDR510W	MSO1	P53604	210 aa	Known RBP	2.74	□□□□□ -1.97
SMT3	YDR510W	YNR066C	P53752	436 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	YLR152C	P54072	576 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	PRP38	Q00723	242 aa	Predicted RBP	2.74	□□□□□ -1.97
SMT3	YDR510W	YET2	Q04210	160 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	THI7	Q05998	598 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	LOA1	Q06508	300 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	YET3	Q07451	203 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	COQ10	Q08058	207 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	MMT2	Q08970	484 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	RFM1	Q12192	310 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	SFM1	Q12314	213 aa		2.74	□□□□□ -1.97
SMT3	YDR510W	PHO2	P07269	559 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	MCK1	P21965	375 aa	Known RBP	2.73	□□□□□ -1.97
SMT3	YDR510W	PPH21	P23594	369 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	DPB2	P24482	689 aa	Predicted RBP	2.73	□□□□□ -1.97
SMT3	YDR510W	YCR043C	P25361	127 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	ATG15	P25641	520 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	SEC1	P30619	724 aa	Known RBP	2.73	□□□□□ -1.97
SMT3	YDR510W	LDS1	P31379	325 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	SPS18	P32572	300 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	KDX1	P36005	433 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	YCR087C-A	P37263	153 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	MAK5	P38112	773 aa	Predicted RBP	2.73	□□□□□ -1.97
SMT3	YDR510W	MRP21	P38175	177 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	YHR127W	P38833	243 aa	Known RBP	2.73	□□□□□ -1.97
SMT3	YDR510W	SRP14	P38985	146 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	KRE29	P40026	464 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	YER121W	P40076	114 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	IRC24	P40580	263 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	IRC18	P47056	224 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	COG7	P53195	279 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	SNZ2	P53824	298 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	CWC25	P53854	179 aa	Known RBP	2.73	□□□□□ -1.97
SMT3	YDR510W	FYV6	P53913	173 aa		2.73	□□□□□ -1.97
SMT3	YDR510W	TPS1	Q00764	495 aa	Known RBP	2.73	□□□□□ -1.97
SMT3	YDR510W	YKR104W	P0CE69	306 aa		2.72	□□□□□ -1.97
SMT3	YDR510W	RPL4A	P10664	362 aa	Known RBP	2.72	□□□□□ -1.97
SMT3	YDR510W	URA6	P15700	204 aa		2.72	□□□□□ -1.97
SMT3	YDR510W	PHO80	P20052	293 aa		2.72	□□□□□ -1.97
SMT3	YDR510W	RPB5	P20434	215 aa		2.72	□□□□□ -1.97
SMT3	YDR510W	GIT1	P25346	518 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 100.6 ms