RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	BTS1	Q12051	335 aa		4.25	□□□□□ -1.73
PDR15	YDR406W	YSF3	P0C074	85 aa	Predicted RBP	4.25	□□□□□ -1.73
PDR15	YDR406W	ZRC1	P20107	442 aa		4.25	□□□□□ -1.73
PDR15	YDR406W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PDR15	YDR406W	SUI1	P32911	108 aa	Known RBP	4.25	□□□□□ -1.73
PDR15	YDR406W	LSM12	P38828	187 aa	Known RBP	4.25	□□□□□ -1.73
PDR15	YDR406W	STE24	P47154	453 aa		4.25	□□□□□ -1.73
PDR15	YDR406W	EXG2	P52911	562 aa		4.25	□□□□□ -1.73
PDR15	YDR406W	MRH4	P53166	561 aa		4.25	□□□□□ -1.73
PDR15	YDR406W	YPL108W	Q02872	168 aa	Predicted RBP	4.25	□□□□□ -1.73
PDR15	YDR406W	YMR210W	Q03649	449 aa		4.25	□□□□□ -1.73
PDR15	YDR406W	SOD2	P00447	233 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YPT1	P01123	206 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	CDC36	P06100	191 aa	Predicted RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	KGD1	P20967	1014 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	TUL1	P36096	758 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YHR210C	P38893	341 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YIL108W	P40483	696 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	CUP9	P41817	306 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YFR020W	P43600	232 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	DPB11	P47027	764 aa	Predicted RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	SSN8	P47821	323 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	MNN10	P50108	393 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	PFA4	Q12006	378 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YDL109C	Q12103	647 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	FSH3	Q99369	266 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	URA3	P03962	267 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	ADE5,7	P07244	802 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	ARG80	P07249	177 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	VPS33	P20795	691 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	CIN5	P40917	295 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	STB1	P42845	420 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	ABM1	P47146	123 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	RAX1	Q08760	435 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	MMT2	Q08970	484 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YCR101C	P25607	182 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	NDC1	P32500	655 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YBL010C	P32788	280 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	MRPL37	P36532	105 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	CEM1	P39525	442 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	SER2	P42941	309 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	CWC23	P52868	283 aa	Predicted RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	RAI1	P53063	387 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	MTQ1	P53944	314 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	ENB1	Q08299	606 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	FRE5	Q08908	694 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	USB1	Q12208	290 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	SIA1	Q12212	622 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	PSF1	Q12488	208 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	HTZ1	Q12692	134 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	HRP1	Q99383	534 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	IMG1	P25626	169 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	HYM1	P32464	399 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	CDC13	P32797	924 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	TMA19	P35691	167 aa	Known RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	IPI1	P38803	334 aa	Predicted RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	FCY21	P40039	528 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	AGE2	P40529	298 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	UBC9	P50623	157 aa	Predicted RBP	4.24	□□□□□ -1.73
PDR15	YDR406W	YNR048W	P53740	393 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	SWS2	P53937	143 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YPL068C	Q02749	293 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	PLP1	Q04004	230 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	YML096W	Q04489	525 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	RNH202	Q05635	350 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	DAP1	Q12091	152 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	RDI1	Q12434	202 aa		4.24	□□□□□ -1.73
PDR15	YDR406W	QCR7	P00128	127 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	PRS3	P38689	320 aa	Known RBP	4.23	□□□□□ -1.73
PDR15	YDR406W	YER137C	P40083	148 aa	Known RBP	4.23	□□□□□ -1.73
PDR15	YDR406W	SEC24	P40482	926 aa	Known RBP	4.23	□□□□□ -1.73
PDR15	YDR406W	PSA1	P41940	361 aa	Known RBP	4.23	□□□□□ -1.73
PDR15	YDR406W	MPC1	P53157	130 aa	Known RBP	4.23	□□□□□ -1.73
PDR15	YDR406W	HXT11	P54862	567 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	TRM13	Q12383	476 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	RAS1	P01119	309 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	FPS1	P23900	669 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	ERV1	P27882	189 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	IGO1	P53897	168 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	PPH21	P23594	369 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	NFS1	P25374	497 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	ARO7	P32178	256 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	NNK1	P36003	928 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	GPX2	P38143	162 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	ALB1	P47019	175 aa	Predicted RBP	4.23	□□□□□ -1.73
PDR15	YDR406W	SMA2	Q04658	369 aa		4.23	□□□□□ -1.73
PDR15	YDR406W	SYC1	Q08553	188 aa	Predicted RBP	4.23	□□□□□ -1.73
PDR15	YDR406W	MET3	P08536	511 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	RPC34	P32910	317 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	AHP1	P38013	176 aa	Known RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	SEC72	P39742	193 aa	Known RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	SLS1	P42900	643 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	PKP2	P53170	491 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	REC102	Q02721	264 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	SKI7	Q08491	747 aa	Predicted RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	PEX27	Q08580	376 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	BMT6	Q12291	365 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	GPM1	P00950	247 aa	Known RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	DBF2	P22204	572 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	RIB5	P38145	238 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms