RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
LCB2	YDR062W	ATS1	P31386	333 aa		4.48	□□□□□ -1.69
LCB2	YDR062W	SHC1	P39000	512 aa		4.48	□□□□□ -1.69
LCB2	YDR062W	RPR2	P40571	144 aa		4.48	□□□□□ -1.69
LCB2	YDR062W	YJR079W	P47126	109 aa		4.48	□□□□□ -1.69
LCB2	YDR062W	YPT32	P51996	222 aa	Known RBP	4.48	□□□□□ -1.69
LCB2	YDR062W	SUR7	P54003	302 aa		4.48	□□□□□ -1.69
LCB2	YDR062W	TRM44	Q02648	567 aa	Known RBP	4.48	□□□□□ -1.69
LCB2	YDR062W	DIG1	Q03063	452 aa	Known RBP	4.48	□□□□□ -1.69
LCB2	YDR062W	ERP1	Q05359	219 aa	Known RBP	4.48	□□□□□ -1.69
LCB2	YDR062W	YLR281C	Q05863	155 aa		4.48	□□□□□ -1.69
LCB2	YDR062W	MHR1	Q06630	226 aa		4.48	□□□□□ -1.69
LCB2	YDR062W	MRX9	Q07349	420 aa	Known RBP	4.48	□□□□□ -1.69
LCB2	YDR062W	ABP140	Q08641	628 aa	Known RBP	4.48	□□□□□ -1.69
LCB2	YDR062W	AUS1	Q08409	1394 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	CYC3	P06182	269 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	YCR102C	P25608	368 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	QRI5	P32344	111 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	YBR241C	P38142	488 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	YIL001W	P40560	513 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	NCA3	P46955	337 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	USE1	P53146	245 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	GET1	P53192	235 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	YNL095C	P53932	642 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	DIA1	P54005	336 aa		4.47	□□□□□ -1.69
LCB2	YDR062W	EBS1	Q03466	884 aa	Known RBP	4.47	□□□□□ -1.69
LCB2	YDR062W	DTD1	Q07648	150 aa	Known RBP	4.47	□□□□□ -1.69
LCB2	YDR062W	YGK3	Q12222	375 aa	Predicted RBP	4.47	□□□□□ -1.69
LCB2	YDR062W	RPL15A	P05748	204 aa	Known RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	RPS18A	P0CX55	146 aa	Known RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	RPS18B	P0CX56	146 aa	Predicted RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	CPR1	P14832	162 aa	Known RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	HOM6	P31116	359 aa	Known RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	YIL152W	P40455	235 aa		4.46	□□□□□ -1.7
LCB2	YDR062W	NOP19	P53317	196 aa	Predicted RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	ASI3	P53983	676 aa		4.46	□□□□□ -1.7
LCB2	YDR062W	RNY1	Q02933	434 aa	Known RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	PLB3	Q08108	686 aa		4.46	□□□□□ -1.7
LCB2	YDR062W	RSA1	Q08932	381 aa		4.46	□□□□□ -1.7
LCB2	YDR062W	YDL199C	Q12407	687 aa		4.46	□□□□□ -1.7
LCB2	YDR062W	TFC7	Q12415	435 aa		4.46	□□□□□ -1.7
LCB2	YDR062W	UTP10	P42945	1769 aa	Known RBP	4.46	□□□□□ -1.7
LCB2	YDR062W	YDR157W	A0A023PZE8	133 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	TRP1	P00912	224 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	MIR1	P23641	311 aa	Known RBP	4.45	□□□□□ -1.7
LCB2	YDR062W	SPS19	P32573	292 aa	Known RBP	4.45	□□□□□ -1.7
LCB2	YDR062W	ATG12	P38316	186 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	CUE1	P38428	203 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	SEC72	P39742	193 aa	Known RBP	4.45	□□□□□ -1.7
LCB2	YDR062W	IRC24	P40580	263 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	HAC1	P41546	238 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	MOB2	P43563	287 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	IBA57	P47158	497 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	SCS3	P53012	380 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	FMP42	Q04991	504 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	DPP1	Q05521	289 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	YLR446W	Q06204	433 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	CDD1	Q06549	142 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	YCT1	Q12235	531 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	RPS3	P05750	240 aa	Known RBP	4.45	□□□□□ -1.7
LCB2	YDR062W	NDT80	P38830	627 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	RPH1	P39956	796 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	TPN1	P53099	579 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	PEX30	Q06169	523 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	YOR114W	Q12219	294 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	YCL012C	Q8J0M4	134 aa		4.45	□□□□□ -1.7
LCB2	YDR062W	RPS14A	P06367	137 aa	Known RBP	4.44	□□□□□ -1.7
LCB2	YDR062W	PMT2	P31382	759 aa		4.44	□□□□□ -1.7
LCB2	YDR062W	RPS14B	P39516	138 aa	Known RBP	4.44	□□□□□ -1.7
LCB2	YDR062W	PEX22	P39718	180 aa		4.44	□□□□□ -1.7
LCB2	YDR062W	UTP18	P40362	594 aa	Predicted RBP	4.44	□□□□□ -1.7
LCB2	YDR062W	XBP1	P40489	647 aa		4.44	□□□□□ -1.7
LCB2	YDR062W	YFL067W	P43537	175 aa		4.44	□□□□□ -1.7
LCB2	YDR062W	GMC1	Q04399	608 aa		4.44	□□□□□ -1.7
LCB2	YDR062W	FAR8	Q05040	523 aa		4.44	□□□□□ -1.7
LCB2	YDR062W	HMS1	Q12398	434 aa		4.44	□□□□□ -1.7
LCB2	YDR062W	QCR7	P00128	127 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	CBS2	P14905	389 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	CMK2	P22517	447 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	RFA3	P26755	122 aa	Known RBP	4.43	□□□□□ -1.7
LCB2	YDR062W	ARC40	P38328	384 aa	Known RBP	4.43	□□□□□ -1.7
LCB2	YDR062W	PET8	P38921	284 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	ERG10	P41338	398 aa	Known RBP	4.43	□□□□□ -1.7
LCB2	YDR062W	YPS5	P53057	165 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	SHY1	P53266	389 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	WSC2	P53832	503 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	FAR10	Q06001	478 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	MFG1	Q07684	458 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	GPM2	Q12008	311 aa		4.43	□□□□□ -1.7
LCB2	YDR062W	IFM1	P25038	676 aa		4.42	□□□□□ -1.7
LCB2	YDR062W	GDH2	P33327	1092 aa	Known RBP	4.42	□□□□□ -1.7
LCB2	YDR062W	PRX1	P34227	261 aa	Known RBP	4.42	□□□□□ -1.7
LCB2	YDR062W	RCK1	P38622	512 aa		4.42	□□□□□ -1.7
LCB2	YDR062W	IKI1	P38874	309 aa		4.42	□□□□□ -1.7
LCB2	YDR062W	MET30	P39014	640 aa		4.42	□□□□□ -1.7
LCB2	YDR062W	PRE6	P40303	254 aa	Known RBP	4.42	□□□□□ -1.7
LCB2	YDR062W	PRM5	P40476	318 aa		4.42	□□□□□ -1.7
LCB2	YDR062W	PCI8	P40512	444 aa		4.42	□□□□□ -1.7
LCB2	YDR062W	NIF3	P53081	288 aa		4.42	□□□□□ -1.7
LCB2	YDR062W	TAF9	Q05027	157 aa		4.42	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 8 ms