RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YMR166CQ03829 368 aa2.44□□□□□ -2.02
UBC9YDL064W GMC2Q06201 188 aa2.44□□□□□ -2.02
UBC9YDL064W YMR316C-AI2HB70 103 aa2.43□□□□□ -2.02
UBC9YDL064W OSM1P21375 501 aaKnown RBP2.43□□□□□ -2.02
UBC9YDL064W VPS1P21576 704 aaKnown RBP2.43□□□□□ -2.02
UBC9YDL064W SDH4P37298 181 aa2.43□□□□□ -2.02
UBC9YDL064W TRM7P38238 310 aaKnown RBP2.43□□□□□ -2.02
UBC9YDL064W PHO89P38361 574 aa2.43□□□□□ -2.02
UBC9YDL064W NBP1P52919 319 aaPredicted RBP2.43□□□□□ -2.02
UBC9YDL064W MIG2P53035 382 aa2.43□□□□□ -2.02
UBC9YDL064W TRM44Q02648 567 aaKnown RBP2.43□□□□□ -2.02
UBC9YDL064W TVP15Q03860 143 aa2.43□□□□□ -2.02
UBC9YDL064W COX20Q04935 205 aa2.43□□□□□ -2.02
UBC9YDL064W SEC10Q06245 871 aa2.43□□□□□ -2.02
UBC9YDL064W HRT1Q08273 121 aa2.43□□□□□ -2.02
UBC9YDL064W MRX4Q12467 430 aa2.43□□□□□ -2.02
UBC9YDL064W YBL112CQ3E7Y4 105 aa2.43□□□□□ -2.02
UBC9YDL064W PAN1P32521 1480 aa2.43□□□□□ -2.02
UBC9YDL064W SSK22P25390 1331 aaPredicted RBP2.42□□□□□ -2.02
UBC9YDL064W POL30P15873 258 aaKnown RBP2.42□□□□□ -2.02
UBC9YDL064W KRE1P17260 313 aa2.42□□□□□ -2.02
UBC9YDL064W HMT1P38074 348 aa2.42□□□□□ -2.02
UBC9YDL064W ARN2P38724 620 aa2.42□□□□□ -2.02
UBC9YDL064W RPE1P46969 238 aa2.42□□□□□ -2.02
UBC9YDL064W YJL144WP47009 104 aa2.42□□□□□ -2.02
UBC9YDL064W NBP35P52920 328 aa2.42□□□□□ -2.02
UBC9YDL064W MNT4P53745 580 aa2.42□□□□□ -2.02
UBC9YDL064W ALG9P53868 555 aaKnown RBP2.42□□□□□ -2.02
UBC9YDL064W SWS2P53937 143 aa2.42□□□□□ -2.02
UBC9YDL064W OST6Q03723 332 aa2.42□□□□□ -2.02
UBC9YDL064W PER33Q12144 273 aa2.42□□□□□ -2.02
UBC9YDL064W YAL064W-BO13512 126 aa2.41□□□□□ -2.02
UBC9YDL064W COX2P00410 251 aa2.41□□□□□ -2.02
UBC9YDL064W COS2P0CX12 379 aa2.41□□□□□ -2.02
UBC9YDL064W COS3P0CX13 379 aa2.41□□□□□ -2.02
UBC9YDL064W ERG2P32352 222 aa2.41□□□□□ -2.02
UBC9YDL064W ALK2P32789 676 aaPredicted RBP2.41□□□□□ -2.02
UBC9YDL064W RPT5P33297 434 aaKnown RBP2.41□□□□□ -2.02
UBC9YDL064W SPL2P38839 148 aa2.41□□□□□ -2.02
UBC9YDL064W SUR2P38992 349 aa2.41□□□□□ -2.02
UBC9YDL064W PRM9P39551 298 aa2.41□□□□□ -2.02
UBC9YDL064W OST3P48439 350 aa2.41□□□□□ -2.02
UBC9YDL064W KAP114P53067 1004 aa2.41□□□□□ -2.02
UBC9YDL064W KAP95Q06142 861 aaKnown RBP2.41□□□□□ -2.02
UBC9YDL064W CTR3Q06686 241 aa2.41□□□□□ -2.02
UBC9YDL064W RLP24Q07915 199 aaKnown RBP2.41□□□□□ -2.02
UBC9YDL064W YOS9Q99220 542 aa2.41□□□□□ -2.02
UBC9YDL064W AI5_BETAQ9ZZX0 354 aa2.41□□□□□ -2.02
UBC9YDL064W INO80P53115 1489 aa2.4□□□□□ -2.02
UBC9YDL064W TDH2P00358 332 aaKnown RBP2.4□□□□□ -2.03
UBC9YDL064W RPL4AP10664 362 aaKnown RBP2.4□□□□□ -2.03
UBC9YDL064W MIG1P27705 504 aa2.4□□□□□ -2.03
UBC9YDL064W CAM1P29547 415 aaKnown RBP2.4□□□□□ -2.03
UBC9YDL064W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
UBC9YDL064W YHL049CP38722 271 aa2.4□□□□□ -2.03
UBC9YDL064W YER188WP40103 239 aa2.4□□□□□ -2.03
UBC9YDL064W BUD13P46947 266 aaPredicted RBP2.4□□□□□ -2.03
UBC9YDL064W PIR5P46999 287 aa2.4□□□□□ -2.03
UBC9YDL064W RPL4BP49626 362 aaKnown RBP2.4□□□□□ -2.03
UBC9YDL064W YGL088WP53151 121 aa2.4□□□□□ -2.03
UBC9YDL064W YOL019WQ08157 551 aa2.4□□□□□ -2.03
UBC9YDL064W RPL24AP04449 155 aaKnown RBP2.39□□□□□ -2.03
UBC9YDL064W HIS3P06633 220 aa2.39□□□□□ -2.03
UBC9YDL064W PEX3P28795 441 aa2.39□□□□□ -2.03
UBC9YDL064W CSG2P35206 410 aa2.39□□□□□ -2.03
UBC9YDL064W NPT1P39683 429 aaKnown RBP2.39□□□□□ -2.03
UBC9YDL064W TAD2P47058 250 aa2.39□□□□□ -2.03
UBC9YDL064W HSH155P49955 971 aaKnown RBP2.39□□□□□ -2.03
UBC9YDL064W MPP6P53725 186 aaPredicted RBP2.39□□□□□ -2.03
UBC9YDL064W YDR114CQ04597 100 aa2.39□□□□□ -2.03
UBC9YDL064W RRT8Q08219 342 aa2.39□□□□□ -2.03
UBC9YDL064W TIM22Q12328 207 aa2.39□□□□□ -2.03
UBC9YDL064W HIS1P00498 297 aaKnown RBP2.38□□□□□ -2.03
UBC9YDL064W HEK2P38199 381 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
UBC9YDL064W TIM21P53220 239 aa2.38□□□□□ -2.03
UBC9YDL064W MAL13P53338 473 aa2.38□□□□□ -2.03
UBC9YDL064W ATC1Q04005 294 aa2.38□□□□□ -2.03
UBC9YDL064W FCF1Q05498 189 aaPredicted RBP2.38□□□□□ -2.03
UBC9YDL064W FEX1Q08913 375 aa2.38□□□□□ -2.03
UBC9YDL064W FEX2Q08991 375 aa2.38□□□□□ -2.03
UBC9YDL064W YPL150WQ12152 901 aa2.38□□□□□ -2.03
UBC9YDL064W YOL107WQ12239 342 aa2.38□□□□□ -2.03
UBC9YDL064W YPR096CO13587 100 aa2.37□□□□□ -2.03
UBC9YDL064W YAR1P46683 200 aa2.37□□□□□ -2.03
UBC9YDL064W RSM27P53305 110 aa2.37□□□□□ -2.03
UBC9YDL064W ALG11P53954 548 aaKnown RBP2.37□□□□□ -2.03
UBC9YDL064W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
UBC9YDL064W EBS1Q03466 884 aaKnown RBP2.37□□□□□ -2.03
UBC9YDL064W CTS2Q06350 511 aa2.37□□□□□ -2.03
UBC9YDL064W SME1Q12330 94 aaPredicted RBP2.37□□□□□ -2.03
UBC9YDL064W ZWF1P11412 505 aaKnown RBP2.36□□□□□ -2.03
UBC9YDL064W TOM40P23644 387 aaKnown RBP2.36□□□□□ -2.03
UBC9YDL064W QRI5P32344 111 aa2.36□□□□□ -2.03
UBC9YDL064W DDI1P40087 428 aa2.36□□□□□ -2.03
UBC9YDL064W YJR012CP47087 207 aa2.36□□□□□ -2.03
UBC9YDL064W DIA1P54005 336 aa2.36□□□□□ -2.03
UBC9YDL064W PLB3Q08108 686 aa2.36□□□□□ -2.03
UBC9YDL064W CLP1Q08685 445 aaPredicted RBP2.36□□□□□ -2.03
UBC9YDL064W YUH1P35127 236 aa2.35□□□□□ -2.03
UBC9YDL064W BIG1P38813 335 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms