RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W ECM19Q06011 112 aa2.52□□□□□ -2.01
DPB3YBR278W LOA1Q06508 300 aa2.52□□□□□ -2.01
DPB3YBR278W DIB1Q06819 143 aaPredicted RBP2.52□□□□□ -2.01
DPB3YBR278W CSM4Q08955 156 aa2.52□□□□□ -2.01
DPB3YBR278W YMR316C-AI2HB70 103 aa2.51□□□□□ -2.01
DPB3YBR278W TDH2P00358 332 aaKnown RBP2.51□□□□□ -2.01
DPB3YBR278W NTG1P31378 399 aa2.51□□□□□ -2.01
DPB3YBR278W ALK2P32789 676 aaPredicted RBP2.51□□□□□ -2.01
DPB3YBR278W MRPS9P38120 278 aa2.51□□□□□ -2.01
DPB3YBR278W MRP21P38175 177 aa2.51□□□□□ -2.01
DPB3YBR278W MED8P38304 223 aa2.51□□□□□ -2.01
DPB3YBR278W SEO1P39709 593 aa2.51□□□□□ -2.01
DPB3YBR278W FRT2P39734 528 aa2.51□□□□□ -2.01
DPB3YBR278W SMB1P40018 196 aaKnown RBP2.51□□□□□ -2.01
DPB3YBR278W EDC2P40023 145 aaPredicted RBP2.51□□□□□ -2.01
DPB3YBR278W AVT7P40501 490 aa2.51□□□□□ -2.01
DPB3YBR278W YIL054WP40524 105 aa2.51□□□□□ -2.01
DPB3YBR278W RPL10P41805 221 aaKnown RBP2.51□□□□□ -2.01
DPB3YBR278W NBP35P52920 328 aa2.51□□□□□ -2.01
DPB3YBR278W YGL118CP53132 145 aa2.51□□□□□ -2.01
DPB3YBR278W ACT1P60010 375 aaKnown RBP2.51□□□□□ -2.01
DPB3YBR278W EBS1Q03466 884 aaKnown RBP2.51□□□□□ -2.01
DPB3YBR278W ARC18Q05933 178 aaKnown RBP2.51□□□□□ -2.01
DPB3YBR278W YDL144CQ07589 356 aa2.51□□□□□ -2.01
DPB3YBR278W AI5_BETAQ9ZZX0 354 aa2.51□□□□□ -2.01
DPB3YBR278W SOD1P00445 154 aaKnown RBP2.5□□□□□ -2.01
DPB3YBR278W MATALPHA1P0CY06 175 aa2.5□□□□□ -2.01
DPB3YBR278W HMLALPHA1P0CY07 175 aa2.5□□□□□ -2.01
DPB3YBR278W TCP1P12612 559 aaKnown RBP2.5□□□□□ -2.01
DPB3YBR278W COX10P21592 462 aa2.5□□□□□ -2.01
DPB3YBR278W RPS5P26783 225 aaKnown RBP2.5□□□□□ -2.01
DPB3YBR278W RPB9P27999 122 aa2.5□□□□□ -2.01
DPB3YBR278W CAM1P29547 415 aaKnown RBP2.5□□□□□ -2.01
DPB3YBR278W TPS2P31688 896 aaKnown RBP2.5□□□□□ -2.01
DPB3YBR278W QRI5P32344 111 aa2.5□□□□□ -2.01
DPB3YBR278W SRB4P32569 687 aa2.5□□□□□ -2.01
DPB3YBR278W HEK2P38199 381 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
DPB3YBR278W LDB7P38210 180 aa2.5□□□□□ -2.01
DPB3YBR278W TCD1P38756 429 aa2.5□□□□□ -2.01
DPB3YBR278W BFR1P38934 470 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
DPB3YBR278W MSS2P40990 351 aa2.5□□□□□ -2.01
DPB3YBR278W OTU1P43558 301 aa2.5□□□□□ -2.01
DPB3YBR278W GLG2P47011 380 aa2.5□□□□□ -2.01
DPB3YBR278W JHD2P47156 728 aaPredicted RBP2.5□□□□□ -2.01
DPB3YBR278W COQ5P49017 307 aa2.5□□□□□ -2.01
DPB3YBR278W MRS2Q01926 470 aa2.5□□□□□ -2.01
DPB3YBR278W CWC21Q03375 135 aaKnown RBP2.5□□□□□ -2.01
DPB3YBR278W KRE28Q04431 385 aa2.5□□□□□ -2.01
DPB3YBR278W PIN3Q06449 215 aa2.5□□□□□ -2.01
DPB3YBR278W AUS1Q08409 1394 aa2.49□□□□□ -2.01
DPB3YBR278W CAT2P32796 670 aaKnown RBP2.49□□□□□ -2.01
DPB3YBR278W POP8P38208 133 aa2.49□□□□□ -2.01
DPB3YBR278W ASP1P38986 381 aaPredicted RBP2.49□□□□□ -2.01
DPB3YBR278W BDH1P39714 382 aa2.49□□□□□ -2.01
DPB3YBR278W YFL012WP43580 148 aa2.49□□□□□ -2.01
DPB3YBR278W HOC1P47124 396 aa2.49□□□□□ -2.01
DPB3YBR278W HSH155P49955 971 aaKnown RBP2.49□□□□□ -2.01
DPB3YBR278W USE1P53146 245 aa2.49□□□□□ -2.01
DPB3YBR278W GIS2P53849 153 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01 RIP-Chip
DPB3YBR278W NOP13P53883 403 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
DPB3YBR278W FMP41P53889 259 aaKnown RBP2.49□□□□□ -2.01
DPB3YBR278W ASI3P53983 676 aa2.49□□□□□ -2.01
DPB3YBR278W SGT2Q12118 346 aaKnown RBP2.49□□□□□ -2.01
DPB3YBR278W ARG80P07249 177 aa2.48□□□□□ -2.01
DPB3YBR278W PHO80P20052 293 aa2.48□□□□□ -2.01
DPB3YBR278W RPO26P20435 155 aa2.48□□□□□ -2.01
DPB3YBR278W HOM6P31116 359 aaKnown RBP2.48□□□□□ -2.01
DPB3YBR278W AVT6P40074 448 aa2.48□□□□□ -2.01
DPB3YBR278W UFD1P53044 361 aa2.48□□□□□ -2.01
DPB3YBR278W CAX4P53223 239 aa2.48□□□□□ -2.01
DPB3YBR278W YGR067CP53243 804 aa2.48□□□□□ -2.01
DPB3YBR278W YNL095CP53932 642 aa2.48□□□□□ -2.01
DPB3YBR278W DXO1Q06349 442 aa2.48□□□□□ -2.01
DPB3YBR278W SNF8Q12483 233 aa2.48□□□□□ -2.01
DPB3YBR278W YPL119C-AQ3E751 87 aa2.48□□□□□ -2.01
DPB3YBR278W RHO1P06780 209 aaKnown RBP2.47□□□□□ -2.01
DPB3YBR278W RPL4AP10664 362 aaKnown RBP2.47□□□□□ -2.01
DPB3YBR278W NOP1P15646 327 aaKnown RBP2.47□□□□□ -2.01
DPB3YBR278W CKA2P19454 339 aa2.47□□□□□ -2.01
DPB3YBR278W RPB4P20433 221 aaPredicted RBP2.47□□□□□ -2.01
DPB3YBR278W OSM1P21375 501 aaKnown RBP2.47□□□□□ -2.01
DPB3YBR278W VPS3P23643 1011 aa2.47□□□□□ -2.01
DPB3YBR278W YBR096WP38256 230 aa2.47□□□□□ -2.01
DPB3YBR278W YHL044WP38727 235 aa2.47□□□□□ -2.01
DPB3YBR278W YJR079WP47126 109 aa2.47□□□□□ -2.01
DPB3YBR278W RPL4BP49626 362 aaKnown RBP2.47□□□□□ -2.01
DPB3YBR278W SMD1Q02260 146 aaPredicted RBP2.47□□□□□ -2.01
DPB3YBR278W PEX10Q05568 337 aa2.47□□□□□ -2.01
DPB3YBR278W YPR098CQ06089 161 aa2.47□□□□□ -2.01
DPB3YBR278W ATG17Q06410 417 aa2.47□□□□□ -2.01
DPB3YBR278W FUS3P16892 353 aaKnown RBP2.46□□□□□ -2.02
DPB3YBR278W EHD3P28817 500 aa2.46□□□□□ -2.02
DPB3YBR278W ERG2P32352 222 aa2.46□□□□□ -2.02
DPB3YBR278W YKT6P36015 200 aaKnown RBP2.46□□□□□ -2.02
DPB3YBR278W JEN1P36035 616 aa2.46□□□□□ -2.02
DPB3YBR278W PHO89P38361 574 aa2.46□□□□□ -2.02
DPB3YBR278W YHL049CP38722 271 aa2.46□□□□□ -2.02
DPB3YBR278W SWT21P53873 357 aaPredicted RBP2.46□□□□□ -2.02
DPB3YBR278W PGA2P53903 129 aa2.46□□□□□ -2.02
DPB3YBR278W CTF19Q02732 369 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms