RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 RFX8Q6ZV50 586 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 TDRD7Q8NHU6 1098 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 MTBPQ96DY7 904 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 MUC3BQ9H195 1237 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 SH3GLB2Q9NR46 395 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 DCTN4Q9UJW0 460 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 POTEB3A0JP26 581 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 POTECB2RU33 542 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 POTEBQ6S5H4 581 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 CASP1P29466 404 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 NBPF15Q8N660 670 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 CENPTQ96BT3 561 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 PGBD4Q96DM1 585 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 RGL1Q9NZL6 768 aa16.91■□□□□ 0.3
CACNA1A-221ENST00000636012 NEK2P51955 445 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 IKBKBO14920 756 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 ZFP42Q96MM3 310 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 USE1Q9NZ43 259 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 SLC9A2Q9UBY0 812 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 TRAF3IP3Q9Y228 551 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 CUL1Q13616 776 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 OTUB1Q96FW1 271 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 TBC1D22BQ9NU19 505 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 QARSP47897 775 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 EIF3BP55884 814 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 AP3B2Q13367 1082 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 ALS2CLQ60I27 953 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 TTC13Q8NBP0 860 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 SLC44A5Q8NCS7 719 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 C11orf70Q9BRQ4 267 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 SNX5Q9Y5X3 404 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 TNPO2O14787 897 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 CAPN1P07384 714 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 ENAHQ8N8S7 591 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 TSSK1BQ9BXA7 367 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 BCL2L14Q9BZR8 327 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 TRIM49BA6NDI0 452 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 KLHL18O94889 574 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 PYGBP11216 843 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 MEI1Q5TIA1 1274 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 TBC1D1Q86TI0 1168 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 EXOC4Q96A65 974 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 AGAP3Q96P47 875 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 UNC45AQ9H3U1 944 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 IP6K2Q9UHH9 426 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 MINPP1Q9UNW1 487 aa16.9■□□□□ 0.3
CACNA1A-221ENST00000636012 GUCA1CO95843 209 aa16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 AKT1P31749 480 aa16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 CHRNA3P32297 505 aa16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 KRT72Q14CN4 511 aa16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 C1orf146Q5VVC0 180 aa16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 FAM47EQ6ZV65 393 aa16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 ZNF564Q8TBZ8 553 aaPredicted RBP16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 PCDHB8Q9UN66 801 aa16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 COPG1Q9Y678 874 aaKnown RBP16.89■□□□□ 0.3
CACNA1A-221ENST00000636012 HDDC2Q7Z4H3 204 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 ELP3Q9H9T3 547 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 RNF14Q9UBS8 474 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 SNX24Q9Y343 169 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 BAZ2BQ9UIF8 2168 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 KRT38O76015 456 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 DDHD2O94830 711 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 CTSHP09668 335 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 ZFXP17010 805 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 UNC13DQ70J99 1090 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 ZNF711Q9Y462 761 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 ERBB3P21860 1342 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 MMEP08473 750 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 C11orf96Q7Z7L8 435 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 PPP2R3CQ969Q6 453 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 LXNQ9BS40 222 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 PRDX5P30044 214 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 SOX11P35716 441 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 DEUP1Q05D60 604 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 PDCLQ13371 301 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 ZNF211Q13398 564 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 DMC1Q14565 340 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 BEND6Q5SZJ8 279 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 LRRC8EQ6NSJ5 796 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 BTBD6Q96KE9 485 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 EML4Q9HC35 981 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 KRT8P05787 483 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 IFNAR1P17181 557 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 DUOXA2Q1HG44 320 aa16.89■□□□□ 0.29
CACNA1A-221ENST00000636012 KDM1AO60341 852 aa16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 ST13P4Q8IZP2 240 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 PRR23AA6NEV1 266 aa16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 H0Y3Z8 333 aa16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 SNAP23O00161 211 aa16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 APOL1O14791 398 aa16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 FTLP02792 175 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-221ENST00000636012 PRKCQQ04759 706 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms