RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 DSC1Q08554 894 aa12.39□□□□□ -0.43
TARDBP-221ENST00000619555 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
TARDBP-221ENST00000619555 MTMR3Q13615 1198 aa12.39□□□□□ -0.43
TARDBP-221ENST00000619555 PCBP1Q15365 356 aaKnown RBP eCLIP12.39□□□□□ -0.43
TARDBP-221ENST00000619555 CCDC43Q96MW1 224 aaKnown RBP12.39□□□□□ -0.43
TARDBP-221ENST00000619555 NXF3Q9H4D5 531 aaKnown RBP12.39□□□□□ -0.43
TARDBP-221ENST00000619555 SFXN1Q9H9B4 322 aa12.39□□□□□ -0.43
TARDBP-221ENST00000619555 GPRC5CQ9NQ84 441 aa12.39□□□□□ -0.43
TARDBP-221ENST00000619555 STK39Q9UEW8 545 aa12.39□□□□□ -0.43
TARDBP-221ENST00000619555 TEX28O15482 410 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 MED24O75448 989 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 NPTXRO95502 500 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 EFEMP2O95967 443 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 URODP06132 367 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 XRCC6P12956 609 aaKnown RBP eCLIP12.38□□□□□ -0.43
TARDBP-221ENST00000619555 MCM7P33993 719 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 KIAA0319Q5VV43 1072 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 UBALD2Q8IYN6 164 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-221ENST00000619555 GSTCDQ8NEC7 633 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 RABGGTAQ92696 567 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 B3GALT6Q96L58 329 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 RPS6KC1Q96S38 1066 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 PRRX2Q99811 253 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 NFKBIZQ9BYH8 718 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 TRIM6Q9C030 488 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-221ENST00000619555 KLK14Q9P0G3 267 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 USTQ9Y2C2 406 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 GIT1Q9Y2X7 761 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 PLXNA3P51805 1871 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
TARDBP-221ENST00000619555 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 LRRIQ4A6NIV6 560 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 ST18O60284 1047 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 GLUD2P49448 558 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 ZNF174Q15697 407 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 CCDC149Q6ZUS6 474 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 ZSCAN31Q96LW9 406 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-221ENST00000619555 COLEC11Q9BWP8 271 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 RXFP1Q9HBX9 757 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 FAM86C1Q9NVL1 165 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 DOCK6Q96HP0 2047 aa12.37□□□□□ -0.43
TARDBP-221ENST00000619555 TTLL13PA6NNM8 815 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 NR1I2O75469 434 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 ADH1AP07327 375 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 SPATA31D3P0C874 917 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 DSG1Q02413 1049 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
TARDBP-221ENST00000619555 SLC27A1Q6PCB7 646 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 SPATA31D4Q6ZUB0 917 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 OTOP3Q7RTS5 596 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 HACE1Q8IYU2 909 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 CMASQ8NFW8 434 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-221ENST00000619555 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 ACSF2Q96CM8 615 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-221ENST00000619555 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 GPR62Q9BZJ7 368 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 FZD8Q9H461 694 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 SH2B1Q9NRF2 756 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-221ENST00000619555 CHST7Q9NS84 486 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 CACNG4Q9UBN1 327 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 SSX2IPQ9Y2D8 614 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 USP20Q9Y2K6 914 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 USP34Q70CQ2 3546 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 MTCL1Q9Y4B5 1905 aaKnown RBP12.36□□□□□ -0.43
TARDBP-221ENST00000619555 DOCK8Q8NF50 2099 aa12.36□□□□□ -0.43
TARDBP-221ENST00000619555 FAM186AA6NE01 2351 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 CCDC195A0A1B0GUA6 201 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 RFPL2O75678 378 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 GLUD1P00367 558 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 FUT10Q6P4F1 479 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 PALB2Q86YC2 1186 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 TMEM105Q8N8V8 129 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 MCPH1Q8NEM0 835 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 C8orf76Q96K31 380 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 PAAF1Q9BRP4 392 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 POLR3CQ9BUI4 534 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-221ENST00000619555 CXCL16Q9H2A7 254 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
TARDBP-221ENST00000619555 PRMT7Q9NVM4 692 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-221ENST00000619555 H0Y858 1186 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 N4BP1O75113 896 aaKnown RBP12.34□□□□□ -0.43
TARDBP-221ENST00000619555 TADA2AO75478 443 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 EDN1P05305 212 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 OR52Z1P0C646 297 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
TARDBP-221ENST00000619555 LIG1P18858 919 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 CYP11B2P19099 503 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 RPA1P27694 616 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 GRIK3Q13003 919 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 ECM1Q16610 540 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms