RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 VPS52Q8N1B4 723 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 SPIRE2Q8WWL2 714 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 MSLNLQ96KJ4 702 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 NECAB3Q96P71 396 aaPredicted RBP21.25■□□□□ 0.99
TCF3-219ENST00000610756 APOL6Q9BWW8 343 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 KMT5AQ9NQR1 393 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 CLEC1BQ9P126 229 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 ARHGAP28Q9P2N2 729 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 USP20Q9Y2K6 914 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 IRAK3Q9Y616 596 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 PLXNA4Q9HCM2 1894 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 BDP1A6H8Y1 2624 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 C2orf71A6NGG8 1288 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 PLS3P13797 630 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 LIG1P18858 919 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 NDUFV1P49821 464 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 SCNN1GP51170 649 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 KCNC3Q14003 757 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 BCL7CQ8WUZ0 217 aaPredicted RBP21.24■□□□□ 0.99
TCF3-219ENST00000610756 BLOC1S4Q9NUP1 217 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 PARP2Q9UGN5 583 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 FBXO2Q9UK22 296 aaPredicted RBP21.24■□□□□ 0.99
TCF3-219ENST00000610756 TNFSF13BQ9Y275 285 aa21.24■□□□□ 0.99
TCF3-219ENST00000610756 NCOR1O75376 2440 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 GLP2RO95838 553 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 CTSAP10619 480 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 MARCKSP29966 332 aaPredicted RBP21.23■□□□□ 0.99
TCF3-219ENST00000610756 DDIT3P35638 169 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 SMTNP53814 917 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 RAD51AP2Q09MP3 1159 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 COASYQ13057 564 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 GIT2Q14161 759 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 SLC39A14Q15043 492 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 DCAF4L1Q3SXM0 396 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 ATF7IP2Q5U623 682 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 EEF1DP3Q658K8 133 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 FAM178BQ8IXR5 827 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 ZBP1Q9H171 429 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 CD207Q9UJ71 328 aa21.23■□□□□ 0.99
TCF3-219ENST00000610756 NR1I2O75469 434 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 IL9P15248 144 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 PLCG1P19174 1290 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 CEBPZQ03701 1054 aaKnown RBP21.22■□□□□ 0.99
TCF3-219ENST00000610756 KARSQ15046 597 aaKnown RBP21.22■□□□□ 0.99
TCF3-219ENST00000610756 TAS1R3Q7RTX0 852 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 APBB1IPQ7Z5R6 666 aaPredicted RBP21.22■□□□□ 0.99
TCF3-219ENST00000610756 LRRC15Q8TF66 581 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 EPSTI1Q96J88 318 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 USP28Q96RU2 1077 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 ACO2Q99798 780 aaKnown RBP21.22■□□□□ 0.99
TCF3-219ENST00000610756 VN1R3Q9BXE9 311 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 PTPRHQ9HD43 1115 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 SNTG2Q9NY99 539 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 KLK14Q9P0G3 267 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 LARSQ9P2J5 1176 aaKnown RBP21.22■□□□□ 0.99
TCF3-219ENST00000610756 ODF2LQ9ULJ1 636 aa21.22■□□□□ 0.99
TCF3-219ENST00000610756 SLC16A4O15374 487 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 HSP90AA1P07900 732 aaKnown RBP21.21■□□□□ 0.99
TCF3-219ENST00000610756 OR1G1P47890 313 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 GRIK3Q13003 919 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 SMAD2Q15796 467 aaKnown RBP21.21■□□□□ 0.99
TCF3-219ENST00000610756 USP49Q70CQ1 688 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 TMEM161BQ8NDZ6 487 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 VN1R2Q8NFZ6 395 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 RAD54LQ92698 747 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 MRPL4Q9BYD3 311 aaKnown RBP21.21■□□□□ 0.99
TCF3-219ENST00000610756 PRKAG3Q9UGI9 489 aa21.21■□□□□ 0.99
TCF3-219ENST00000610756 ATG2AQ2TAZ0 1938 aa21.2■□□□□ 0.99
TCF3-219ENST00000610756 TCF20Q9UGU0 1960 aaKnown RBP21.2■□□□□ 0.98
TCF3-219ENST00000610756 NPHP3-ACAD11A0A0J9YXS1 232 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 MBTPS2O43462 519 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 EFEMP2O95967 443 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 SMAD4Q13485 552 aaKnown RBP21.2■□□□□ 0.98
TCF3-219ENST00000610756 CLUL1Q15846 466 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 SPECC1Q5M775 1068 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 GPBP1Q86WP2 473 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 SMRP1Q8NCR6 262 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 RASSF8Q8NHQ8 419 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 KCNN1Q92952 543 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 COLEC11Q9BWP8 271 aa21.2■□□□□ 0.98
TCF3-219ENST00000610756 BARX2Q9UMQ3 279 aaPredicted RBP21.2■□□□□ 0.98
TCF3-219ENST00000610756 RECQL4O94761 1208 aa21.19■□□□□ 0.98
TCF3-219ENST00000610756 SRGAP2BP0DMP2 458 aa21.19■□□□□ 0.98
TCF3-219ENST00000610756 NASPP49321 788 aaPredicted RBP21.19■□□□□ 0.98
TCF3-219ENST00000610756 RBM10P98175 930 aaKnown RBP21.19■□□□□ 0.98
TCF3-219ENST00000610756 MCM6Q14566 821 aa21.19■□□□□ 0.98
TCF3-219ENST00000610756 LARP4BQ92615 738 aaKnown RBP21.19■□□□□ 0.98
TCF3-219ENST00000610756 CLIC6Q96NY7 704 aa21.19■□□□□ 0.98
TCF3-219ENST00000610756 RPS6KC1Q96S38 1066 aa21.19■□□□□ 0.98
TCF3-219ENST00000610756 TARS2Q9BW92 718 aaKnown RBP21.19■□□□□ 0.98
TCF3-219ENST00000610756 MARCH5Q9NX47 278 aa21.19■□□□□ 0.98
TCF3-219ENST00000610756 CCDC39Q9UFE4 941 aa21.19■□□□□ 0.98
TCF3-219ENST00000610756 PRG3Q9Y2Y8 225 aaPredicted RBP21.19■□□□□ 0.98
TCF3-219ENST00000610756 H0YCG3 227 aa21.18■□□□□ 0.98
TCF3-219ENST00000610756 LILRB3O75022 631 aa21.18■□□□□ 0.98
TCF3-219ENST00000610756 CLASP2O75122 1294 aaKnown RBP21.18■□□□□ 0.98
TCF3-219ENST00000610756 SOD2P04179 222 aa21.18■□□□□ 0.98
TCF3-219ENST00000610756 THP07101 528 aa21.18■□□□□ 0.98
TCF3-219ENST00000610756 MAPTP10636 758 aaKnown RBP21.18■□□□□ 0.98
TCF3-219ENST00000610756 SCP2P22307 547 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 248.8 ms