RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 ZNF165P49910 485 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 FAM189BP81408 668 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 ADAM9Q13443 819 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 DSC3Q14574 896 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 NOLC1Q14978 699 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMAD4-214ENST00000592186 ZNF568Q3ZCX4 644 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 ANO6Q4KMQ2 910 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 ZCWPW2Q504Y3 356 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 DEFB128Q7Z7B8 93 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 ENOX1Q8TC92 643 aaKnown RBP11.65□□□□□ -0.54
SMAD4-214ENST00000592186 BADQ92934 168 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 PGBD4Q96DM1 585 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 CPB2Q96IY4 423 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 CEP63Q96MT8 703 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
SMAD4-214ENST00000592186 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 TSPY26PQ9H489 355 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 DMAC2Q9NW81 257 aa11.65□□□□□ -0.54
SMAD4-214ENST00000592186 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.54
SMAD4-214ENST00000592186 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 ENPP3O14638 875 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 IKBKBO14920 756 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 MAPK13O15264 365 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 OGTO15294 1046 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 EXTL3O43909 919 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 GNA14O95837 355 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 FGBP02675 491 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 ADSSP30520 456 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-214ENST00000592186 SPATA1Q5VX52 437 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 SLC39A4Q6P5W5 647 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 USP37Q86T82 979 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 CSGALNACT2Q8N6G5 542 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 XXYLT1Q8NBI6 393 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 RSPH1Q8WYR4 309 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 ELAC1Q9H777 363 aaKnown RBP11.64□□□□□ -0.55
SMAD4-214ENST00000592186 FAM105AQ9NUU6 356 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 ANKFY1Q9P2R3 1169 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 CTNND2Q9UQB3 1225 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 FRMD4BQ9Y2L6 1034 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 ZMYM2Q9UBW7 1377 aa11.64□□□□□ -0.55
SMAD4-214ENST00000592186 ZNF233A6NK53 670 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 BECN2A8MW95 431 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 ABLIM1O14639 778 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 CLIC2O15247 247 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 EXOC3O60645 756 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 EDN1P05305 212 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 CLTAP09496 248 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 NR2F2P24468 414 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 PSMC2P35998 433 aaKnown RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 GRM5P41594 1212 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 YARSP54577 528 aaKnown RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 MYL5Q02045 173 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 EEF1DP3Q658K8 133 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 PSRC1Q6PGN9 363 aaPredicted RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 FILIP1Q7Z7B0 1213 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 MRPL10Q7Z7H8 261 aaKnown RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 ZBTB33Q86T24 672 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 FAM114A1Q8IWE2 563 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 GPD1LQ8N335 351 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 ACAP3Q96P50 834 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 TSPAN18Q96SJ8 248 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 MKNK1Q9BUB5 465 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 CCDC94Q9BW85 323 aaPredicted RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 OSBPL7Q9BZF2 842 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 CDT1Q9H211 546 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 MTIF3Q9H2K0 278 aaKnown RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 THAP9Q9H5L6 903 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 PLEKHA5Q9HAU0 1116 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 TOPORSQ9NS56 1045 aaPredicted RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 HSPBP1Q9NZL4 362 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 ZMYND8Q9ULU4 1186 aaPredicted RBP11.63□□□□□ -0.55
SMAD4-214ENST00000592186 USP20Q9Y2K6 914 aa11.63□□□□□ -0.55
SMAD4-214ENST00000592186 C9IYK1 514 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 SLC16A3O15427 465 aaKnown RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 HOXA2O43364 376 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 RRP9O43818 475 aaKnown RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 NPTXRO95502 500 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 AMHP03971 560 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 STAG3L1P0CL83 205 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 SYN1P17600 705 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 PMS1P54277 932 aaKnown RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 STX17P56962 302 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 TPM4P67936 248 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 ENPEPQ07075 957 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 SURF1Q15526 300 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 UBXN11Q5T124 520 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 RTN4RL1Q86UN2 441 aaPredicted RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 ECHDC2Q86YB7 292 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 CD302Q8IX05 232 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 ZC3H3Q8IXZ2 948 aaKnown RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 THNSL1Q8IYQ7 743 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 DUSP9Q99956 384 aaKnown RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 CBWD1Q9BRT8 395 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms