RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 RPS6KC1Q96S38 1066 aa20.66■□□□□ 0.9
PRKCSH-209ENST00000589838 RAB20Q9NX57 234 aa20.66■□□□□ 0.9
PRKCSH-209ENST00000589838 ZSCAN5CA6NGD5 496 aaPredicted RBP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 SPDYE16A6NNV3 312 aaPredicted RBP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 BHMG1C9JSJ3 638 aaPredicted RBP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 HNRNPDLO14979 420 aaKnown RBP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 MTA2O94776 668 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 ICAM3P32942 547 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 HNRNPH2P55795 449 aaKnown RBP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 HLTFQ14527 1009 aaKnown RBP eCLIP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 PALB2Q86YC2 1186 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 CCDC60Q8IWA6 550 aaPredicted RBP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 IQCKQ8N0W5 287 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 LRRC45Q96CN5 670 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 KREMEN1Q96MU8 473 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 GPRC5DQ9NZD1 345 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 NOCTQ9UK39 431 aaKnown RBP20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 DOCK5Q9H7D0 1870 aa20.65■□□□□ 0.9
PRKCSH-209ENST00000589838 ZNF233A6NK53 670 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 A6NNZ2 444 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 FGGP02679 453 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 FAM153BP0C7A2 387 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 HSPA6P17066 643 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 TUBB8Q3ZCM7 444 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 FAM153CQ494X1 144 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 SLC39A4Q6P5W5 647 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 CD302Q8IX05 232 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 SEMA4DQ92854 862 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 KCNN1Q92952 543 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 POLR3FQ9H1D9 316 aaPredicted RBP20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 XPNPEP1Q9NQW7 623 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 ARHGAP28Q9P2N2 729 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 FAM153AQ9UHL3 310 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 ALG6Q9Y672 507 aa20.64■□□□□ 0.9
PRKCSH-209ENST00000589838 CYP26A1O43174 497 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 CHRNB2P17787 502 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 HSPA9P38646 679 aaKnown RBP20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 PDE6CP51160 858 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 ERVK-9P63128 1117 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 NOP9Q86U38 636 aaKnown RBP20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 TRPM4Q8TD43 1214 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 HELQQ8TDG4 1101 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 KAT5Q92993 513 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 ZIM3Q96PE6 472 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 DDX47Q9H0S4 455 aaKnown RBP20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 FAM114A2Q9NRY5 505 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 GGA3Q9NZ52 723 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 FBXO40Q9UH90 709 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 COG5Q9UP83 839 aa20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 UTP11Q9Y3A2 253 aaKnown RBP20.64■□□□□ 0.89
PRKCSH-209ENST00000589838 LOC285556D6RIA3 1793 aa20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 TULP1O00294 542 aaPredicted RBP20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 GUCY2FP51841 1108 aa20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 POLGP54098 1239 aaPredicted RBP20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 SP4Q02446 784 aa20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 STRN3Q13033 797 aa20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 PRPF4BQ13523 1007 aaKnown RBP20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 RNPC3Q96LT9 517 aaKnown RBP20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 PLEKHA4Q9H4M7 779 aa20.63■□□□□ 0.89
PRKCSH-209ENST00000589838 SYNGAP1Q96PV0 1343 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 EXTL3O43909 919 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 ATG7O95352 703 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 LIG4P49917 911 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 SOX10P56693 466 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 CDR2Q01850 454 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 MTERF2Q49AM1 385 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 SV2AQ7L0J3 742 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 C1orf131Q8NDD1 294 aaKnown RBP20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 RAB17Q9H0T7 212 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 WNT8AQ9H1J5 351 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 ZNF302Q9NR11 478 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 CYP11B1P15538 503 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 GCNT1Q02742 428 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 EMC2Q15006 297 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 GPC2Q8N158 579 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 ANKRD35Q8N283 1001 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.895e-12■■□□□ 12.7
PRKCSH-209ENST00000589838 TAS1R2Q8TE23 839 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 PKNOX2Q96KN3 472 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 PCDHB18PQ96TA0 734 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 POP1Q99575 1024 aaKnown RBP20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 UVRAGQ9P2Y5 699 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 FZD1Q9UP38 647 aa20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 MAFBQ9Y5Q3 323 aaPredicted RBP20.62■□□□□ 0.89
PRKCSH-209ENST00000589838 ADGRA3Q8IWK6 1321 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 GGPS1O95749 300 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 OATP04181 439 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 DLATP10515 647 aaKnown RBP20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 ITGA4P13612 1032 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 PTENP60484 403 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 FMO1Q01740 532 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 SLFN12LQ6IEE8 588 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 LRIG3Q6UXM1 1119 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 SLC47A2Q86VL8 602 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 FAM213AQ9BRX8 229 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 AMACRQ9UHK6 382 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
PRKCSH-209ENST00000589838 CYP1A2P05177 515 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 MTMR3Q13615 1198 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 WDR44Q5JSH3 913 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms