RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
HDAC5-208ENST00000588419 RPS6KC1Q96S38 1066 aa15.22■□□□□ 0.03
HDAC5-208ENST00000588419 GPRC5CQ9NQ84 441 aa15.22■□□□□ 0.03
HDAC5-208ENST00000588419 CACNG4Q9UBN1 327 aa15.22■□□□□ 0.03
HDAC5-208ENST00000588419 FBXL21Q9UKT6 434 aa15.22■□□□□ 0.03
HDAC5-208ENST00000588419 INPPL1O15357 1258 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 TEX28O15482 410 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 GFRA3O60609 400 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 MCM7P33993 719 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 RARRES1P49788 294 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 ANAPC15P60006 121 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 ELMSAN1Q6PJG2 1045 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 OTOP3Q7RTS5 596 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 PALB2Q86YC2 1186 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 HASPINQ8TF76 798 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 ANKEF1Q9NU02 776 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 USTQ9Y2C2 406 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 MYH11P35749 1972 aa15.21■□□□□ 0.03
HDAC5-208ENST00000588419 CCDC195A0A1B0GUA6 201 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 GALR2O43603 387 aaPredicted RBP15.2■□□□□ 0.02
HDAC5-208ENST00000588419 RFPL2O75678 378 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 ARL2P36404 184 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 NEK4P51957 841 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 AMHR2Q16671 573 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 SLC27A1Q6PCB7 646 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 COLEC11Q9BWP8 271 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 PIDD1Q9HB75 910 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 GIT1Q9Y2X7 761 aa15.2■□□□□ 0.02
HDAC5-208ENST00000588419 LILRB3O75022 631 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 LYPLA2O95372 231 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 RPL17P18621 184 aaKnown RBP15.19■□□□□ 0.02
HDAC5-208ENST00000588419 RFX1P22670 979 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 DSC1Q08554 894 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 PCBP1Q15365 356 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC5-208ENST00000588419 ASTLQ6HA08 431 aaPredicted RBP15.19■□□□□ 0.02
HDAC5-208ENST00000588419 FUT10Q6P4F1 479 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 GET4Q7L5D6 327 aaPredicted RBP15.19■□□□□ 0.02
HDAC5-208ENST00000588419 ZBTB8OSQ8IWT0 167 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 SMG7Q92540 1137 aaKnown RBP15.19■□□□□ 0.02
HDAC5-208ENST00000588419 HSD17B14Q9BPX1 270 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 IRF2BPLQ9H1B7 796 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
HDAC5-208ENST00000588419 CLUHO75153 1309 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 CITO14578 2027 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 CASTOR2A6NHX0 329 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 STK25O00506 426 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 NARSO43776 548 aaKnown RBP15.18■□□□□ 0.02
HDAC5-208ENST00000588419 GRIK3Q13003 919 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 TDGQ13569 410 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 SAFBQ15424 915 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDAC5-208ENST00000588419 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 C15orf39Q6ZRI6 1047 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 IFNLR1Q8IU57 520 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-208ENST00000588419 SIX5Q8N196 739 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 RSAD2Q8WXG1 361 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 RIN2Q8WYP3 895 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-208ENST00000588419 STAMQ92783 540 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 GPR62Q9BZJ7 368 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 KCNK12Q9HB15 430 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 ADAM28Q9UKQ2 775 aa15.18■□□□□ 0.02
HDAC5-208ENST00000588419 MED24O75448 989 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 TADA2AO75478 443 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 CFHP08603 1231 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 DSG1Q02413 1049 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 POU5F1BQ06416 359 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 GNL2Q13823 731 aaKnown RBP15.17■□□□□ 0.02
HDAC5-208ENST00000588419 USP41Q3LFD5 358 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 KIAA0319Q5VV43 1072 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 CWF19L1Q69YN2 538 aaKnown RBP15.17■□□□□ 0.02
HDAC5-208ENST00000588419 PRSS55Q6UWB4 352 aaPredicted RBP15.17■□□□□ 0.02
HDAC5-208ENST00000588419 CEP57Q86XR8 500 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 CCDC83Q8IWF9 413 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
HDAC5-208ENST00000588419 ST13P5Q8NFI4 369 aaPredicted RBP15.17■□□□□ 0.02
HDAC5-208ENST00000588419 MTMR9Q96QG7 549 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 PRMT7Q9NVM4 692 aaPredicted RBP15.17■□□□□ 0.02
HDAC5-208ENST00000588419 DPP7Q9UHL4 492 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 DUSP12Q9UNI6 340 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 USP20Q9Y2K6 914 aa15.17■□□□□ 0.02
HDAC5-208ENST00000588419 ARHGEF35A5YM69 484 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 TGM5O43548 720 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 ST18O60284 1047 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
HDAC5-208ENST00000588419 ST3GAL1Q11201 340 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 PRPF4BQ13523 1007 aaKnown RBP15.16■□□□□ 0.02
HDAC5-208ENST00000588419 HSP90AA2PQ14568 343 aaPredicted RBP15.16■□□□□ 0.02
HDAC5-208ENST00000588419 ZNF174Q15697 407 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 CATSPER3Q86XQ3 398 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 MCPH1Q8NEM0 835 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 ERMNQ8TAM6 284 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 DEPTORQ8TB45 409 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 C8orf76Q96K31 380 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 PAAF1Q9BRP4 392 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 TUFT1Q9NNX1 390 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 SNTG2Q9NY99 539 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 CA14Q9ULX7 337 aa15.16■□□□□ 0.02
HDAC5-208ENST00000588419 SF3B1O75533 1304 aaKnown RBP eCLIP15.16■□□□□ 0.029e-6■■■■■ 68.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms