RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 KLHL14Q9P2G3 628 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 MYO1AQ9UBC5 1043 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 RABL2AQ9UBK7 228 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 TTLL3Q9Y4R7 772 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 TIMM13Q9Y5L4 95 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 SLC4A7Q9Y6M7 1214 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 X6R8D5 127 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 ARHGEF12Q9NZN5 1544 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 NPHP3Q7Z494 1330 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 YTHDC2Q9H6S0 1430 aaKnown RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 ATAD2BQ9ULI0 1458 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 GPR75-ASB3A0A0A6YYF3 556 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 GOLGA6L10A0A0M3HER8 536 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CCDC162PA2VCL2 907 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 H7BY64 318 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 NDUFAB1O14561 156 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 BIRC5O15392 142 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PRODHO43272 600 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 MARCH6O60337 910 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PPP1R11O60927 126 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 ZBED4O75132 1171 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 MTRF1O75570 445 aaKnown RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 DNAJC8O75937 253 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 ALOX15P16050 662 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 GLDCP23378 1020 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 HOXD10P28358 340 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 SMARCA1P28370 1054 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PDE6BP35913 854 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CTCFP49711 727 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CCT8P50990 548 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 GALK1P51570 392 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 ARPC4P59998 168 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 SUMO1P63165 101 aaKnown RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 MXRA7P84157 204 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 NSUN2Q08J23 767 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CBX3Q13185 183 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 RCN1Q15293 331 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PARP10Q53GL7 1025 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 LACTB2Q53H82 288 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 FAAH2Q6GMR7 532 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 THOC7Q6I9Y2 204 aaKnown RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CLEC4GQ6UXB4 293 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PACS1Q6VY07 963 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CCDC121Q6ZUS5 278 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 NCCRP1Q6ZVX7 275 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 MAATS1Q7Z4T9 603 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CABP7Q86V35 215 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 FAM228AQ86W67 206 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 LMNTD2Q8IXW0 634 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 TRIML1Q8N9V2 468 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PLEKHO2Q8TD55 490 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CTNNBL1Q8WYA6 563 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 DPF3Q92784 378 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 KISS1RQ969F8 398 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 IL17RAQ96F46 866 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 SMC6Q96SB8 1091 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 EIF2AQ9BY44 585 aaKnown RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PLEKHA4Q9H4M7 779 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 KAT14Q9H8E8 782 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 HOXC10Q9NYD6 342 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PFDN2Q9UHV9 154 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 PUF60Q9UHX1 559 aaKnown RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 ASB3Q9Y575 518 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 BZW2Q9Y6E2 419 aaKnown RBP6.68□□□□□ -1.34
SMAD4-203ENST00000585448 AK9Q5TCS8 1911 aa6.68□□□□□ -1.34
SMAD4-203ENST00000585448 DISP1Q96F81 1524 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 LAMC3Q9Y6N6 1575 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 BICDL2A1A5D9 508 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 TMEM110-MUSTN1A8MSY1 372 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 WDR46O15213 610 aaKnown RBP6.67□□□□□ -1.34
SMAD4-203ENST00000585448 P4HA2O15460 535 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 TTI1O43156 1089 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 N4BP1O75113 896 aaKnown RBP6.67□□□□□ -1.34
SMAD4-203ENST00000585448 TSPAN15O95858 294 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 SYF2O95926 243 aaKnown RBP6.67□□□□□ -1.34
SMAD4-203ENST00000585448 PDHBP11177 359 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 SLC6A11P48066 632 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 CCNG1P51959 295 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 GNGT1P63211 74 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 NTRK3Q16288 839 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 RNF187Q5TA31 235 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-203ENST00000585448 MROH9Q5TGP6 573 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 CREB3L3Q68CJ9 461 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 CCDC70Q6NSX1 233 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 ATF7IPQ6VMQ6 1270 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 RPTNQ6XPR3 784 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 MAMDC2Q7Z304 686 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-203ENST00000585448 SIRT2Q8IXJ6 389 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 PDILTQ8N807 584 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 IGSF22Q8N9C0 903 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 ZSWIM2Q8NEG5 633 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 KLHDC4Q8TBB5 520 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 TAF4BQ92750 862 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 TSPAN17Q96FV3 270 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 EXOC2Q96KP1 924 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 TTC14Q96N46 770 aa6.67□□□□□ -1.34
SMAD4-203ENST00000585448 SH3GL2Q99962 352 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms