RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 KRT39Q6A163 491 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 PHLDB3Q6NSJ2 640 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 AFG1LQ8WV93 481 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 RNPEPQ9H4A4 650 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 LUC7LQ9NQ29 371 aaKnown RBP30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 CTAGE9A4FU28 777 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 LDHAP00338 332 aaKnown RBP30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 GNRH1P01148 92 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 HOXD10P28358 340 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 PTK2Q05397 1052 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 GPR88Q9GZN0 384 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 C2orf40Q9H1Z8 148 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 SUGCTQ9HAC7 445 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 AGO2Q9UKV8 859 aaKnown RBP30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 ZNF215Q9UL58 517 aaPredicted RBP30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 MRFAP1Q9Y605 127 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 COL1A2P08123 1366 aa30.84■■■□□ 2.53
CTDNEP1-210ENST00000574322 A0A0B4J269 797 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 ASAP2O43150 1006 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 GFPT2O94808 682 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 SMPD1P17405 629 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 DRAP1Q14919 205 aaPredicted RBP30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 C10orf76Q5T2E6 689 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 USP6NLQ92738 828 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 C16orf70Q9BSU1 422 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 GJD2Q9UKL4 321 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 TFR2Q9UP52 801 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 ZSWIM8A7E2V4 1837 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 ATP8B3O60423 1300 aa30.83■■■□□ 2.53
CTDNEP1-210ENST00000574322 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 MSCO60682 206 aa30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 C22orf31O95567 290 aa30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 ARID5AQ03989 594 aa30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 PRKCZQ05513 592 aa30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 ZNF571Q7Z3V5 609 aaPredicted RBP30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 NAPGQ99747 312 aaPredicted RBP30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 FAM213AQ9BRX8 229 aa30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 SUCLA2Q9P2R7 463 aaPredicted RBP30.82■■■□□ 2.52
CTDNEP1-210ENST00000574322 PSMD6Q15008 389 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 TARS2Q9BW92 718 aaKnown RBP30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 HAPLN2Q9GZV7 340 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 GABRQQ9UN88 632 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 A0A087X0T9 212 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 MAGEB2O15479 319 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 CCDC172P0C7W6 258 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 FAM228BP0C875 321 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 RGS2P41220 211 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 GPC3P51654 580 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 POU5F1BQ06416 359 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 TFDP1Q14186 410 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 GPIHBP1Q8IV16 184 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 ZBTB8OSQ8IWT0 167 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 LRRC71Q8N4P6 559 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 LINC01465Q8N7H1 131 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 CCDC127Q96BQ5 260 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 SRRDQ9UH36 339 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 ADAMTS1Q9UHI8 967 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 NENFQ9UMX5 172 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 TRIM17Q9Y577 477 aa30.81■■■□□ 2.52
CTDNEP1-210ENST00000574322 MGAMO43451 1857 aa30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 EDN1P05305 212 aa30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 INSRRP14616 1297 aa30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 FLT3LGP49771 235 aa30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 CRELD2Q6UXH1 353 aaPredicted RBP30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 C15orf39Q6ZRI6 1047 aa30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 TRAPPC12Q8WVT3 735 aa30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 MRPL4Q9BYD3 311 aaKnown RBP30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 NFKBIZQ9BYH8 718 aa30.8■■■□□ 2.52
CTDNEP1-210ENST00000574322 CYP2B6P20813 491 aa30.79■■■□□ 2.52
CTDNEP1-210ENST00000574322 EFCAB12Q6NXP0 572 aa30.79■■■□□ 2.52
CTDNEP1-210ENST00000574322 RNF149Q8NC42 400 aa30.79■■■□□ 2.52
CTDNEP1-210ENST00000574322 SECISBP2LQ93073 1101 aaKnown RBP30.79■■■□□ 2.52
CTDNEP1-210ENST00000574322 DUSP10Q9Y6W6 482 aa30.79■■■□□ 2.52
CTDNEP1-210ENST00000574322 EVI5O60447 810 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 RNF10Q8N5U6 811 aaKnown RBP30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 TOM1L1O75674 476 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 BMS1Q14692 1282 aaKnown RBP30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 MAPK6Q16659 721 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 VPS36Q86VN1 386 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 FBXL13Q8NEE6 735 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 ZBTB45Q96K62 511 aaPredicted RBP30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 SYT11Q9BT88 431 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 CDC23Q9UJX2 597 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 ZHX1Q9UKY1 873 aaPredicted RBP30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 DOCK3Q8IZD9 2030 aa30.78■■■□□ 2.52
CTDNEP1-210ENST00000574322 IGHA2P01877 340 aa30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 MMP3P08254 477 aa30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 SRGAP2CP0DJJ0 459 aa30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 NLRP11P59045 1033 aaKnown RBP30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 SV2AQ7L0J3 742 aa30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 POP1Q99575 1024 aaKnown RBP30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 APBA2Q99767 749 aa30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 MSTO1Q9BUK6 570 aa30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 FZD8Q9H461 694 aa30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 UBE2TQ9NPD8 197 aaPredicted RBP30.77■■■□□ 2.52
CTDNEP1-210ENST00000574322 ANO9A1A5B4 782 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 H3BRB1 525 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 PTENP60484 403 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 AMPD2Q01433 879 aa30.76■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms