RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 TPH2Q8IWU9 490 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 C4orf19Q8IY42 314 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SMYD4Q8IYR2 804 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 EMID1Q96A84 441 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 LXNQ9BS40 222 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 BHMT2Q9H2M3 363 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 CHMP2AO43633 222 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ITGB1P05556 798 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SP100P23497 879 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 GUCY2CP25092 1073 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 STX17P56962 302 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 PSMC5P62195 406 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CYP4A11Q02928 519 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ITGB3BPQ13352 177 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ALCAMQ13740 583 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 TRIM14Q14142 442 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 GIT2Q14161 759 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 VSTM4Q8IW00 320 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SPC24Q8NBT2 197 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 KIAA0895Q8NCT3 520 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CCDC112Q8NEF3 446 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 PPTC7Q8NI37 304 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SPPL3Q8TCT6 385 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ATP6V0A1Q93050 837 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 IQCDQ96DY2 449 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 MED15Q96RN5 788 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SAMSN1Q9NSI8 373 aaKnown RBP15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ANKEF1Q9NU02 776 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SORCS3Q9UPU3 1222 aa15.64■□□□□ 0.09
TRAPPC6B-206ENST00000556765 OTOGLQ3ZCN5 2332 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ANKRD11Q6UB99 2663 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ARHGEF35A5YM69 484 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SPATA31C2B4DYI2 1134 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 KCNJ18B7U540 433 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 EIF3DO15371 548 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ZNF500O60304 480 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CAND2O75155 1236 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 GNA14O95837 355 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 PSAPP07602 524 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CLCN5P51795 746 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 RBM10P98175 930 aaKnown RBP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 KCNJ12Q14500 433 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 TCP11X2Q5H9J9 407 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 RINT1Q6NUQ1 792 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CCDC186Q7Z3E2 898 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CSGALNACT2Q8N6G5 542 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ZNF689Q96CS4 500 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CCDC43Q96MW1 224 aaKnown RBP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 MFSD1Q9H3U5 465 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 TLE6Q9H808 572 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 RGL1Q9NZL6 768 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 DDX41Q9UJV9 622 aaKnown RBP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SAMM50Q9Y512 469 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 PCDHA10Q9Y5I2 948 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 MYH9P35579 1960 aaKnown RBP15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ITIH6Q6UXX5 1313 aa15.63■□□□□ 0.09
TRAPPC6B-206ENST00000556765 C17orf102A2RUQ5 167 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 TPM1P09493 284 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 MAPTP10636 758 aaKnown RBP15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 KCNA2P16389 499 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ABCD1P33897 745 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 LAMC2Q13753 1193 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CTTNQ14247 550 aaKnown RBP15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 NEDD9Q14511 834 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 NR1I3Q14994 352 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 BMT2Q1RMZ1 405 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 EDRF1Q3B7T1 1238 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ARSHQ5FYA8 562 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SPECC1LQ69YQ0 1117 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 C1orf186Q6ZWK4 172 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 OTUD6AQ7L8S5 288 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 TMC6Q7Z403 805 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 POF1BQ8WVV4 589 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 CEP63Q96MT8 703 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 REEP2Q9BRK0 252 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 PARVGQ9HBI0 331 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 JPH1Q9HDC5 661 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SLC39A2Q9NP94 309 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 DLL3Q9NYJ7 618 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SLC9A2Q9UBY0 812 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 KCNG1Q9UIX4 513 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 PCDHA2Q9Y5H9 948 aa15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ARID2Q68CP9 1835 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 TREHO43280 583 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 FAM13AO94988 1023 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 LMNAP02545 664 aaKnown RBP15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 HOXD8P13378 290 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SCP2P22307 547 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 SFPQP23246 707 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ZNF131P52739 623 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 FKBP3Q00688 224 aaKnown RBP15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 MIS18BP1Q6P0N0 1132 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 KLHL23Q8NBE8 558 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 VN1R2Q8NFZ6 395 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 ATP8B4Q8TF62 1192 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 RTN4Q9NQC3 1192 aaKnown RBP15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 PPME1Q9Y570 386 aa15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRAPPC6B-206ENST00000556765 MRPL42Q9Y6G3 142 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms