RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 RUBCNQ92622 972 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 SHDQ96IW2 340 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 HINFPQ9BQA5 517 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 EIF2AQ9BY44 585 aaKnown RBP13.25□□□□□ -0.29
ACTN1-221ENST00000556571 MIOSQ9NXC5 875 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 VAV3Q9UKW4 847 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 GIT1Q9Y2X7 761 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 CPLX1O14810 134 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 SLC37A4O43826 429 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 TSPAN1O60635 241 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
ACTN1-221ENST00000556571 SCNN1GP51170 649 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 STARD6P59095 220 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 PTENP60484 403 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-221ENST00000556571 EMC2Q15006 297 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 EPHA7Q15375 998 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 XKR9Q5GH70 373 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 PPP4R3AQ6IN85 833 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 FUT10Q6P4F1 479 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 GET4Q7L5D6 327 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-221ENST00000556571 BORCS6Q96GS4 357 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 ZFP42Q96MM3 310 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 LXNQ9BS40 222 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 GPR62Q9BZJ7 368 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-221ENST00000556571 CSRNP2Q9H175 543 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-221ENST00000556571 WRAP73Q9P2S5 460 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-221ENST00000556571 HES2Q9Y543 173 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 NUMBLQ9Y6R0 609 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 CACNA1IQ9P0X4 2223 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 EPG5Q9HCE0 2579 aa13.24□□□□□ -0.29
ACTN1-221ENST00000556571 DMXL1Q9Y485 3027 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 MED19A0JLT2 244 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-221ENST00000556571 F8W810 466 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 INO80B-WBP1J3KQ70 363 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 TBX3O15119 743 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 ZMYND10O75800 440 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
ACTN1-221ENST00000556571 FSHRP23945 695 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 TFDP1Q14186 410 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 NPY5RQ15761 445 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-221ENST00000556571 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 CPB2Q96IY4 423 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 B3GALT6Q96L58 329 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 MTRQ99707 1265 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 APOL6Q9BWW8 343 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 ZSWIM4Q9H7M6 989 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 DOCK8Q8NF50 2099 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 CACNA1BQ00975 2339 aa13.23□□□□□ -0.29
ACTN1-221ENST00000556571 DNAH14Q0VDD8 3507 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 SPTBN2O15020 2390 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 CCDC194A0A1B0GVG4 234 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 MARCH6O60337 910 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 TADA2AO75478 443 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 GLULP15104 373 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 GPC5P78333 572 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
ACTN1-221ENST00000556571 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 NEK8Q86SG6 692 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 GLYCTKQ8IVS8 523 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 GSTCDQ8NEC7 633 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 NAP1L4Q99733 375 aaKnown RBP13.22□□□□□ -0.29
ACTN1-221ENST00000556571 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 DLL3Q9NYJ7 618 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 RGL1Q9NZL6 768 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 CDH7Q9ULB5 785 aa13.22□□□□□ -0.29
ACTN1-221ENST00000556571 KANSL1LA0AUZ9 987 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 CCNT1O60563 726 aaKnown RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 KINO60870 393 aaKnown RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 HNRNPA1P09651 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 ARF4P18085 180 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 RPL17P18621 184 aaKnown RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 AKAP5P24588 427 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 MBTD1Q05BQ5 628 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 GRIK3Q13003 919 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 AMHR2Q16671 573 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 PARM1Q6UWI2 310 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 GRASPQ7Z6J2 395 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 SKAP1Q86WV1 359 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 DCLK2Q8N568 766 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 SUMF1Q8NBK3 374 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 HAS1Q92839 578 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 DYDC2Q96IM9 177 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 RPP25Q9BUL9 199 aaKnown RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 BCO2Q9BYV7 579 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 NXF3Q9H4D5 531 aaKnown RBP13.21□□□□□ -0.29
ACTN1-221ENST00000556571 XPNPEP1Q9NQW7 623 aa13.21□□□□□ -0.29
ACTN1-221ENST00000556571 FRYLO94915 3013 aa13.21□□□□□ -0.3
ACTN1-221ENST00000556571 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.39e-6■■■■■ 87.9
ACTN1-221ENST00000556571 POTEMA6NI47 508 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms