RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 LIG4P49917 911 aa21.29■■□□□ 1
DDX55-207ENST00000540763 ZNF568Q3ZCX4 644 aa21.29■■□□□ 1
DDX55-207ENST00000540763 ZC2HC1CQ53FD0 456 aaPredicted RBP21.29■■□□□ 1
DDX55-207ENST00000540763 CLLU1OSQ5K130 101 aa21.29■■□□□ 1
DDX55-207ENST00000540763 PPP2R2DQ66LE6 453 aa21.29■■□□□ 1
DDX55-207ENST00000540763 AGMOQ6ZNB7 445 aa21.29■■□□□ 1
DDX55-207ENST00000540763 CDR2LQ86X02 465 aaPredicted RBP21.29■■□□□ 1
DDX55-207ENST00000540763 RNF169Q8NCN4 708 aa21.29■■□□□ 1
DDX55-207ENST00000540763 BICD1Q96G01 975 aa21.29■■□□□ 1
DDX55-207ENST00000540763 SAMD11Q96NU1 681 aa21.29■■□□□ 1
DDX55-207ENST00000540763 ACCSQ96QU6 501 aa21.29■■□□□ 1
DDX55-207ENST00000540763 CDX2Q99626 313 aaPredicted RBP21.29■■□□□ 1
DDX55-207ENST00000540763 MRPL9Q9BYD2 267 aaKnown RBP21.29■■□□□ 1
DDX55-207ENST00000540763 CDT1Q9H211 546 aa21.29■■□□□ 1
DDX55-207ENST00000540763 SEMA6BQ9H3T3 888 aa21.29■■□□□ 1
DDX55-207ENST00000540763 NXF3Q9H4D5 531 aaKnown RBP21.29■■□□□ 1
DDX55-207ENST00000540763 TMEM206Q9H813 350 aa21.29■■□□□ 1
DDX55-207ENST00000540763 RSAD1Q9HA92 442 aa21.29■■□□□ 1
DDX55-207ENST00000540763 EXOC1Q9NV70 894 aa21.29■■□□□ 1
DDX55-207ENST00000540763 TBC1D7Q9P0N9 293 aa21.29■■□□□ 1
DDX55-207ENST00000540763 GIT1Q9Y2X7 761 aa21.29■■□□□ 1
DDX55-207ENST00000540763 RWDD3Q9Y3V2 267 aa21.29■■□□□ 1
DDX55-207ENST00000540763 TRIP11Q15643 1979 aa21.28■■□□□ 1
DDX55-207ENST00000540763 LCHNA4D1U4 455 aa21.28■■□□□ 1
DDX55-207ENST00000540763 LINC01553A4QN01 128 aa21.28■■□□□ 1
DDX55-207ENST00000540763 FGFR1P11362 822 aa21.28■■□□□ 1
DDX55-207ENST00000540763 CASP5P51878 434 aa21.28■■□□□ 1
DDX55-207ENST00000540763 MCL1Q07820 350 aa21.28■■□□□ 1
DDX55-207ENST00000540763 BTG3Q14201 252 aaPredicted RBP21.28■■□□□ 1
DDX55-207ENST00000540763 KCNB1Q14721 858 aa21.28■■□□□ 1
DDX55-207ENST00000540763 NOLC1Q14978 699 aaKnown RBP eCLIP21.28■■□□□ 1
DDX55-207ENST00000540763 GLB1LQ6UWU2 654 aa21.28■■□□□ 1
DDX55-207ENST00000540763 EPM2AIP1Q7L775 607 aaPredicted RBP21.28■■□□□ 1
DDX55-207ENST00000540763 LRRC43Q8N309 656 aa21.28■■□□□ 1
DDX55-207ENST00000540763 FIBCD1Q8N539 461 aa21.28■■□□□ 1
DDX55-207ENST00000540763 CLP1Q92989 425 aaKnown RBP21.28■■□□□ 1
DDX55-207ENST00000540763 CASD1Q96PB1 797 aa21.28■■□□□ 1
DDX55-207ENST00000540763 USP20Q9Y2K6 914 aa21.28■■□□□ 1
DDX55-207ENST00000540763 COL4A4P53420 1690 aaPredicted RBP21.28■■□□□ 1
DDX55-207ENST00000540763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.27■■□□□ 1
DDX55-207ENST00000540763 CARNS1A5YM72 827 aa21.27■■□□□ 1
DDX55-207ENST00000540763 TBKBP1A7MCY6 615 aa21.27■■□□□ 1
DDX55-207ENST00000540763 CLDN3O15551 220 aa21.27■■□□□ 1
DDX55-207ENST00000540763 RHOBTB3O94955 611 aa21.27■■□□□ 1
DDX55-207ENST00000540763 RPN1P04843 607 aaKnown RBP21.27■■□□□ 1
DDX55-207ENST00000540763 PRR29P0C7W0 189 aa21.27■■□□□ 1
DDX55-207ENST00000540763 MYBP10242 640 aa21.27■■□□□ 1
DDX55-207ENST00000540763 GRM5P41594 1212 aa21.27■■□□□ 1
DDX55-207ENST00000540763 TAP1Q03518 808 aa21.27■■□□□ 1
DDX55-207ENST00000540763 KYAT1Q16773 422 aa21.27■■□□□ 1
DDX55-207ENST00000540763 KMT5BQ4FZB7 885 aa21.27■■□□□ 1
DDX55-207ENST00000540763 FGFBP2Q9BYJ0 223 aa21.27■■□□□ 1
DDX55-207ENST00000540763 STYXL1Q9Y6J8 313 aa21.27■■□□□ 1
DDX55-207ENST00000540763 OFD1O75665 1012 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 IBSPP21815 317 aaPredicted RBP21.26■□□□□ 0.99
DDX55-207ENST00000540763 BMT2Q1RMZ1 405 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 SLFN12LQ6IEE8 588 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 SPATA20Q8TB22 786 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 ZNF507Q8TCN5 953 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 URGCPQ8TCY9 931 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 HELQQ8TDG4 1101 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 LPPQ93052 612 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 GSDMAQ96QA5 445 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 TGS1Q96RS0 853 aaKnown RBP21.26■□□□□ 0.99
DDX55-207ENST00000540763 TCHPQ9BT92 498 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 COL25A1Q9BXS0 654 aaPredicted RBP21.26■□□□□ 0.99
DDX55-207ENST00000540763 ZNF576Q9H609 170 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 LMBRD1Q9NUN5 540 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 KANSL3Q9P2N6 904 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 ANKFY1Q9P2R3 1169 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 HES2Q9Y543 173 aa21.26■□□□□ 0.99
DDX55-207ENST00000540763 MEIS3P2A8K0S8 358 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 LINC00271P0C7V0 271 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 ANK1P16157 1881 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 GATMP50440 423 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 ERVK-21P61565 698 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 NOMO2Q5JPE7 1267 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 SLC39A4Q6P5W5 647 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 MAFAQ8NHW3 353 aaPredicted RBP21.25■□□□□ 0.99
DDX55-207ENST00000540763 CCDC94Q9BW85 323 aaPredicted RBP21.25■□□□□ 0.99
DDX55-207ENST00000540763 GTPBP4Q9BZE4 634 aaKnown RBP21.25■□□□□ 0.99
DDX55-207ENST00000540763 TTYH1Q9H313 450 aaPredicted RBP21.25■□□□□ 0.99
DDX55-207ENST00000540763 RMND1Q9NWS8 449 aa21.25■□□□□ 0.99
DDX55-207ENST00000540763 A0A0B4J269 797 aa21.24■□□□□ 0.99
DDX55-207ENST00000540763 ARHGEF15O94989 841 aa21.24■□□□□ 0.99
DDX55-207ENST00000540763 SMC2O95347 1197 aa21.24■□□□□ 0.99
DDX55-207ENST00000540763 SNRPFP62306 86 aaKnown RBP21.24■□□□□ 0.99
DDX55-207ENST00000540763 PNOCQ13519 176 aa21.24■□□□□ 0.99
DDX55-207ENST00000540763 PAN2Q504Q3 1202 aaKnown RBP21.24■□□□□ 0.99
DDX55-207ENST00000540763 HPS3Q969F9 1004 aa21.24■□□□□ 0.99
DDX55-207ENST00000540763 ZBTB45Q96K62 511 aaPredicted RBP21.24■□□□□ 0.99
DDX55-207ENST00000540763 TOPORSQ9NS56 1045 aaPredicted RBP21.24■□□□□ 0.99
DDX55-207ENST00000540763 MRPL42Q9Y6G3 142 aaKnown RBP21.24■□□□□ 0.99
DDX55-207ENST00000540763 ARL5CA6NH57 179 aa21.23■□□□□ 0.99
DDX55-207ENST00000540763 C5orf67F2Z3F1 127 aa21.23■□□□□ 0.99
DDX55-207ENST00000540763 OGTO15294 1046 aa21.23■□□□□ 0.99
DDX55-207ENST00000540763 RECQL4O94761 1208 aa21.23■□□□□ 0.99
DDX55-207ENST00000540763 PRPF6O94906 941 aaKnown RBP21.23■□□□□ 0.99
DDX55-207ENST00000540763 KIF20AO95235 890 aa21.23■□□□□ 0.99
DDX55-207ENST00000540763 LAG3P18627 525 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms