RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 PLPP4Q5VZY2 271 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 PTCRAQ6ISU1 281 aaPredicted RBP23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 FAM173BQ6P4H8 233 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 ADGRD2Q7Z7M1 963 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 GPBP1Q86WP2 473 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 CDR2LQ86X02 465 aaPredicted RBP23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 COLGALT2Q8IYK4 626 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 VPS52Q8N1B4 723 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 MRPL43Q8N983 215 aaKnown RBP23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 TMEM87AQ8NBN3 555 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 KCNN1Q92952 543 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 POLD4Q9HCU8 107 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 DNAJB4Q9UDY4 337 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 SSX2IPQ9Y2D8 614 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 IRAK3Q9Y616 596 aa23.44■■□□□ 1.34
UBE2D3-229ENST00000510129 NT5C1B-RDH14C9J2C7 533 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 ZSCAN22P10073 491 aaPredicted RBP23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 SCNN1GP51170 649 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 RAD51AP2Q09MP3 1159 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 NT5DC1Q5TFE4 455 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 CCDC73Q6ZRK6 1079 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 RBM23Q86U06 439 aaKnown RBP23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 ZFP42Q96MM3 310 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 COLEC11Q9BWP8 271 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 TOPORSQ9NS56 1045 aaPredicted RBP23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 BLOC1S4Q9NUP1 217 aa23.43■■□□□ 1.34
UBE2D3-229ENST00000510129 GRXCR2A6NFK2 248 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 H3BQ06 376 aaPredicted RBP23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 TNFRSF10AO00220 468 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 NRP1O14786 923 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 SLC16A4O15374 487 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 PPP6R2O75170 966 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 TBCAO75347 108 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 FAM13AO94988 1023 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 YEATS4O95619 227 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 CTSAP10619 480 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 LTBRP36941 435 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 AFF1P51825 1210 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 ARSHQ5FYA8 562 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 RRAGBQ5VZM2 374 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 TMEM184AQ6ZMB5 413 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 EPSTI1Q96J88 318 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 ACO2Q99798 780 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 REEP2Q9BRK0 252 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 ZBP1Q9H171 429 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 PARVGQ9HBI0 331 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 CD207Q9UJ71 328 aa23.42■■□□□ 1.34
UBE2D3-229ENST00000510129 TDRD15B5MCY1 1934 aaKnown RBP23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 PRUNE2Q8WUY3 3088 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 TTLL13PA6NNM8 815 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 SFI1A8K8P3 1242 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 SPTLC2O15270 562 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 MCF2P10911 925 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 GTF2F1P35269 517 aaKnown RBP eCLIP23.41■■□□□ 1.347e-7■■■□□ 15.7
UBE2D3-229ENST00000510129 OR1G1P47890 313 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 ZNF131P52739 623 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 YARSP54577 528 aaKnown RBP23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 COASYQ13057 564 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 ZNF568Q3ZCX4 644 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 ZPBP2Q6X784 338 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 LINC00301Q8NCQ3 95 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 TMEM161BQ8NDZ6 487 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 GSTCDQ8NEC7 633 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 TCHPQ9BT92 498 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 CCDC94Q9BW85 323 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 SNTG2Q9NY99 539 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 PRKAG3Q9UGI9 489 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 MYH11P35749 1972 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 MYH15Q9Y2K3 1946 aa23.41■■□□□ 1.34
UBE2D3-229ENST00000510129 C2orf71A6NGG8 1288 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 TBX10O75333 385 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 TOM1L1O75674 476 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 RECQL4O94761 1208 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 CXCL14O95715 111 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 F13A1P00488 732 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 THP07101 528 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 MAPTP10636 758 aaKnown RBP23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 NCKAP1LP55160 1127 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 TUSC3Q13454 348 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 SMAD4Q13485 552 aaKnown RBP23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 DHX8Q14562 1220 aaKnown RBP23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 MCM6Q14566 821 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 MPZL3Q6UWV2 235 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 PPFIBP1Q86W92 1011 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 TMEM173Q86WV6 379 aaPredicted RBP23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 MYCT1Q8N699 235 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 PTPRHQ9HD43 1115 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 KLK14Q9P0G3 267 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 CFAP45Q9UL16 551 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 PCDHGC5Q9Y5F6 944 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 UNC80Q8N2C7 3258 aa23.4■■□□□ 1.34
UBE2D3-229ENST00000510129 HIDE1A8MVS5 230 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 PER2O15055 1255 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 BRD1O95696 1058 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 EDN1P05305 212 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 HOXB8P17481 243 aaPredicted RBP23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 CA8P35219 290 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 GRM5P41594 1212 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 EEF1DP3Q658K8 133 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms