RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ITGB1BP2Q9UKP3 347 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 COA3Q9Y2R0 106 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 SNX13Q9Y5W8 968 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 NRXN3Q9Y4C0 1643 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 CPS1P31327 1500 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 LRRC7Q96NW7 1537 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 SPATA31E1Q6ZUB1 1445 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 CNTNAP4Q9C0A0 1308 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 IQGAP1P46940 1657 aa4.96□□□□□ -1.62
HMGB1P21-201ENST00000502313 PLEKHG1Q9ULL1 1385 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CAPN8A6NHC0 703 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 C1QTNF9BB2RNN3 333 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ARNTLO00327 626 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 DDX3XO00571 662 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ADAMTS3O15072 1205 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 MGEA5O60502 916 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 NDUFS2O75306 463 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 DDX58O95786 925 aaKnown RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 F13BP05160 661 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 VEGFAP15692 232 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 AGXTP21549 392 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 XPAP23025 273 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 HTR1BP28222 390 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CACNB3P54284 484 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ARL4CP56559 192 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 EGR3Q06889 387 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ZNF543Q08ER8 600 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 GALNT1Q10472 559 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 STARD3Q14849 445 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 SLC14A2Q15849 920 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 HSF5Q4G112 596 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 FKBP15Q5T1M5 1219 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 HLA-DQA1Q5Y7H0 255 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 HIBCHQ6NVY1 386 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ENOSF1Q7L5Y1 443 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CD163Q86VB7 1156 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CISD2Q8N5K1 135 aaKnown RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 C2orf69Q8N8R5 385 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ATG16L2Q8NAA4 619 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 PCYOX1LQ8NBM8 494 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 SHKBP1Q8TBC3 707 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ADAMTS18Q8TE60 1221 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 ASB11Q8WXH4 323 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CENPIQ92674 756 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 GATA6Q92908 595 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 FERMT2Q96AC1 680 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 HRASLS5Q96KN8 279 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 MMP19Q99542 508 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 SDF4Q9BRK5 362 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 TMEM120AQ9BXJ8 343 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CELF4Q9BZC1 486 aaKnown RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 LMAN2LQ9H0V9 348 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 DUSP15Q9H1R2 295 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CLDND1Q9NY35 253 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 GIMAP2Q9UG22 337 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 SRPK3Q9UPE1 567 aa4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 TIMM13Q9Y5L4 95 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P21-201ENST00000502313 CLTCL1P53675 1640 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 NEXMIFQ5QGS0 1516 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 A0A1W2PQJ5 194 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 FSD2A1L4K1 749 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 CCDC66A2RUB6 948 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 POM121BA6NF01 834 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SMTNL1A8MU46 457 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 FGF10O15520 208 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 AHCYL1O43865 530 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 ARIH2O95376 493 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 IGLV1-40P01703 118 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 GNAT1P11488 350 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SRFP11831 508 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 LSP1P33241 339 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 AGFG1P52594 562 aaKnown RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 OXCT1P55809 520 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SMAD3P84022 425 aaKnown RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 DUSP4Q13115 394 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 LSAMPQ13449 338 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 PRKG1Q13976 671 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 PLCB4Q15147 1175 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 ZNF174Q15697 407 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SMAD2Q15796 467 aaKnown RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 ARHGAP44Q17R89 818 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 PGS1Q32NB8 556 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 ANO6Q4KMQ2 910 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 DNAJC21Q5F1R6 531 aaKnown RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 MFSD4BQ5TF39 518 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 LMBR1LQ6UX01 489 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 BRINP3Q76B58 766 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 CPNE8Q86YQ8 564 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SPACA3Q8IXA5 215 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 COLGALT2Q8IYK4 626 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 CACNA2D3Q8IZS8 1091 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 ARL10Q8N8L6 244 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 FLCNQ8NFG4 579 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 UCMAQ8WVF2 138 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 TRAPPC12Q8WVT3 735 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 IPCEF1Q8WWN9 437 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 COA7Q96BR5 231 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 TMEM41AQ96HV5 264 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 FCRL2Q96LA5 508 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 NT5C1BQ96P26 610 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms