RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 LRRD1A4D1F6 860 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 HMGB1P1B2RPK0 211 aaPredicted RBP14.41□□□□□ -0.1
GPC1-209ENST00000495100 ADRB2P07550 413 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 POTEJP0CG39 1038 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 MFAP3P55082 362 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 KRT17Q04695 432 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 SPIRE1Q08AE8 756 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 GLE1Q53GS7 698 aaKnown RBP14.41□□□□□ -0.1
GPC1-209ENST00000495100 KCNT1Q5JUK3 1230 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 ZNF449Q6P9G9 518 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 NCAPG2Q86XI2 1143 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 CCDC13Q8IYE1 715 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 ANKS4BQ8N8V4 417 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 KIFAP3Q92845 792 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 COX16Q9P0S2 106 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 RNF14Q9UBS8 474 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 TRAF3IP3Q9Y228 551 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 PITPNM2Q9BZ72 1349 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 O00370 1275 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 PJA2O43164 708 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 WEE2P0C1S8 567 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 GBP2P32456 591 aaPredicted RBP14.41□□□□□ -0.1
GPC1-209ENST00000495100 BRDTQ58F21 947 aaPredicted RBP14.41□□□□□ -0.1
GPC1-209ENST00000495100 SCYL2Q6P3W7 929 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 INTS8Q75QN2 995 aaKnown RBP14.41□□□□□ -0.1
GPC1-209ENST00000495100 HOOK3Q86VS8 718 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 KCNV2Q8TDN2 545 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 HSD17B14Q9BPX1 270 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 TARS2Q9BW92 718 aaKnown RBP14.41□□□□□ -0.1
GPC1-209ENST00000495100 IMPG2Q9BZV3 1241 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 SMARCA1P28370 1054 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 RPL21P46778 160 aaKnown RBP14.41□□□□□ -0.1
GPC1-209ENST00000495100 SESN3P58005 492 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 IRX4P78413 519 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 MMS22LQ6ZRQ5 1243 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 RFX8Q6ZV50 586 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 C4orf33Q8N1A6 199 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 TTLL6Q8N841 843 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 PCDHB18PQ96TA0 734 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 MXRA8Q9BRK3 442 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 ERP44Q9BS26 406 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 FAM114A2Q9NRY5 505 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 FGFR1OP2Q9NVK5 253 aa14.41□□□□□ -0.1
GPC1-209ENST00000495100 INO80B-WBP1J3KQ70 363 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 MEFVO15553 781 aaPredicted RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 GRAP2O75791 330 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 ZSCAN5DPP0CG00 497 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 CUL1Q13616 776 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 TMEM130Q8N3G9 435 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 LRRC71Q8N4P6 559 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 SEMA4DQ92854 862 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 ARHGEF2Q92974 986 aaKnown RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 INO80BQ9C086 356 aaPredicted RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 CHST7Q9NS84 486 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 STK32BQ9NY57 414 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 ASNSP08243 561 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 ATF2P15336 505 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 HOXA10P31260 410 aaPredicted RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 HNRNPH1P31943 449 aaKnown RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 RARRES1P49788 294 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 PPP2R5DQ14738 602 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 CYP4A22Q5TCH4 519 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 GDF3Q9NR23 364 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 ANAPC5Q9UJX4 755 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 RIPK3Q9Y572 518 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 TCP11X1B4DZS4 312 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 SGK1O00141 431 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 RWDD2BP57060 319 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 ITGB3BPQ13352 177 aaPredicted RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 NAA25Q14CX7 972 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 TKFCQ3LXA3 575 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 NBPF12Q5TAG4 269 aaPredicted RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 LRRC34Q8IZ02 419 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 ADAM22Q9P0K1 906 aa14.4□□□□□ -0.1
GPC1-209ENST00000495100 MRPL42Q9Y6G3 142 aaKnown RBP14.4□□□□□ -0.1
GPC1-209ENST00000495100 IGKV6D-41A0A0C4DH26 115 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 H0Y3Z8 333 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 NUMBP49757 651 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 PRPF38AQ8NAV1 312 aaKnown RBP14.39□□□□□ -0.11
GPC1-209ENST00000495100 SEC16BQ96JE7 1060 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 SIX2Q9NPC8 291 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 ROBO3Q96MS0 1386 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 CCDC188H7C350 402 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 K7ERI5 159 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 BANF1O75531 89 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 PSMD10O75832 226 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 RALAP11233 206 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 DPEP1P16444 411 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 NPTX2P47972 431 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 TRPC3Q13507 836 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 ICE2Q659A1 982 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 TMC3Q7Z5M5 1100 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 PASKQ96RG2 1323 aa14.39□□□□□ -0.11
GPC1-209ENST00000495100 RARAP10276 462 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 ETS1P14921 441 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms