RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 NGRNQ9NPE2 291 aaKnown RBP17.48■□□□□ 0.39
GABPA-203ENST00000487266 SNTG2Q9NY99 539 aa17.48■□□□□ 0.39
GABPA-203ENST00000487266 BDP1A6H8Y1 2624 aa17.48■□□□□ 0.39
GABPA-203ENST00000487266 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.47■□□□□ 0.39
GABPA-203ENST00000487266 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
GABPA-203ENST00000487266 OR1G1P47890 313 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 DSC1Q08554 894 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 SMAD4Q13485 552 aaKnown RBP17.47■□□□□ 0.39
GABPA-203ENST00000487266 PDE12Q6L8Q7 609 aaKnown RBP17.47■□□□□ 0.39
GABPA-203ENST00000487266 USP49Q70CQ1 688 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 DDX53Q86TM3 631 aaKnown RBP17.47■□□□□ 0.39
GABPA-203ENST00000487266 SYT2Q8N9I0 419 aaPredicted RBP17.47■□□□□ 0.39
GABPA-203ENST00000487266 SMRP1Q8NCR6 262 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 AK8Q96MA6 479 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 UBN1Q9NPG3 1134 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 CDH22Q9UJ99 828 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 GIT1Q9Y2X7 761 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 PHLPP2Q6ZVD8 1323 aa17.47■□□□□ 0.39
GABPA-203ENST00000487266 SLC16A4O15374 487 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 RECQL4O94761 1208 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 PLCG1P19174 1290 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 GUCY2CP25092 1073 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 UBA7P41226 1012 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 KCNC3Q14003 757 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.39
GABPA-203ENST00000487266 SMAD2Q15796 467 aaKnown RBP17.46■□□□□ 0.39
GABPA-203ENST00000487266 PUS10Q3MIT2 529 aaKnown RBP17.46■□□□□ 0.39
GABPA-203ENST00000487266 ATF7IP2Q5U623 682 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 HACE1Q8IYU2 909 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 CEP120Q8N960 986 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 MRPL43Q8N983 215 aaKnown RBP17.46■□□□□ 0.39
GABPA-203ENST00000487266 SNX21Q969T3 373 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 CLIC6Q96NY7 704 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 CDCA3Q99618 268 aaPredicted RBP17.46■□□□□ 0.39
GABPA-203ENST00000487266 TMEM175Q9BSA9 504 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 BLOC1S4Q9NUP1 217 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 ARHGAP28Q9P2N2 729 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
GABPA-203ENST00000487266 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
GABPA-203ENST00000487266 PTGESO14684 152 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 STX6O43752 255 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 CXCL14O95715 111 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 BMP15O95972 392 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 CTSAP10619 480 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 SSTR3P32745 418 aaPredicted RBP17.45■□□□□ 0.38
GABPA-203ENST00000487266 EFNA5P52803 228 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 ZP2Q05996 745 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 COASYQ13057 564 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 PTPN14Q15678 1187 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 ARSHQ5FYA8 562 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 FOXD4L5Q5VV16 416 aaPredicted RBP17.45■□□□□ 0.38
GABPA-203ENST00000487266 TAS1R1Q7RTX1 841 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 RASSF8Q8NHQ8 419 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 FEZF2Q8TBJ5 459 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 FOXD4L4Q8WXT5 416 aaPredicted RBP17.45■□□□□ 0.38
GABPA-203ENST00000487266 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 B3GALT6Q96L58 329 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 USP28Q96RU2 1077 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 RPS6KC1Q96S38 1066 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 PAAF1Q9BRP4 392 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 ADPGKQ9BRR6 497 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 USP15Q9Y4E8 981 aaPredicted RBP17.45■□□□□ 0.38
GABPA-203ENST00000487266 HCFC2Q9Y5Z7 792 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 PLXNA3P51805 1871 aa17.45■□□□□ 0.38
GABPA-203ENST00000487266 K7ERI5 159 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 CLASP2O75122 1294 aaKnown RBP17.44■□□□□ 0.38
GABPA-203ENST00000487266 ALDH2P05091 517 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 LONP1P36776 959 aaKnown RBP17.44■□□□□ 0.38
GABPA-203ENST00000487266 GRIK3Q13003 919 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 MCM6Q14566 821 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 GLRA4Q5JXX5 417 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 ANKRD54Q6NXT1 300 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 GPBP1Q86WP2 473 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 HSCBQ8IWL3 235 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 GJD3Q8N144 294 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 CALML4Q96GE6 196 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 REEP2Q9BRK0 252 aa17.44■□□□□ 0.38
GABPA-203ENST00000487266 TARS2Q9BW92 718 aaKnown RBP17.44■□□□□ 0.38
GABPA-203ENST00000487266 CASTOR2A6NHX0 329 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 C2CD2LO14523 706 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 PLS3P13797 630 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 EPCAMP16422 314 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 DCAF4L1Q3SXM0 396 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 ZNF568Q3ZCX4 644 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 ZBTB33Q86T24 672 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 HASPINQ8TF76 798 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 RAD54LQ92698 747 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 ACO2Q99798 780 aaKnown RBP17.43■□□□□ 0.38
GABPA-203ENST00000487266 CDT1Q9H211 546 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 EPHX3Q9H6B9 360 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 CITO14578 2027 aa17.43■□□□□ 0.38
GABPA-203ENST00000487266 ZMYM2Q9UBW7 1377 aa17.42■□□□□ 0.38
GABPA-203ENST00000487266 ABLIM1O14639 778 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms