RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	TAF6L	Q9Y6J9	622 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234		A0A087WZ62	844 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	FAM86B1	E9PN63	330 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	DDHD2	O94830	711 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	POU2F2	P09086	479 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	FAM86B2	P0C5J1	330 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	OR1G1	P47890	313 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	AGMO	Q6ZNB7	445 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	PRR23B	Q6ZRT6	265 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	TPRG1	Q6ZUI0	275 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	PALB2	Q86YC2	1186 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	RNF168	Q8IYW5	571 aa	Predicted RBP	13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	CCDC82	Q8N4S0	544 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	NIFK	Q9BYG3	293 aa	Known RBP	13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	PARD6A	Q9NPB6	346 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	CHST7	Q9NS84	486 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	AGPAT5	Q9NUQ2	364 aa		13.72	□□□□□ -0.21
SBF1-208	ENST00000477234	IGLV3-22	A0A075B6J6	115 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	TMEM8B	A6NDV4	472 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234		K7ELQ4	463 aa	Predicted RBP	13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	ECI2	O75521	394 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	NCL	P19338	710 aa	Known RBP	13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	ANTXR2	P58335	489 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	SIM2	Q14190	667 aa	Predicted RBP	13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	UVSSA	Q2YD98	709 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	LONRF3	Q496Y0	759 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	XKR3	Q5GH77	459 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	PPM1L	Q5SGD2	360 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	WWC2	Q6AWC2	1192 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	LILRA6	Q6PI73	481 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234		Q6ZUG5	572 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	SRGAP1	Q7Z6B7	1085 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	RHPN2	Q8IUC4	686 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	COLGALT2	Q8IYK4	626 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	FEZF2	Q8TBJ5	459 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	FGF13	Q92913	245 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	ZNF668	Q96K58	619 aa	Predicted RBP	13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	MBOAT7	Q96N66	472 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	RIT2	Q99578	217 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	AGXT2	Q9BYV1	514 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	CHRD	Q9H2X0	955 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	BARHL2	Q9NY43	387 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	GDE1	Q9NZC3	331 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	LIMCH1	Q9UPQ0	1083 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	MTF2	Q9Y483	593 aa	Predicted RBP	13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	PPME1	Q9Y570	386 aa		13.71	□□□□□ -0.21
SBF1-208	ENST00000477234	IGKV6-21	A0A0C4DH24	114 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	POMC	P01189	267 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	ITGA4	P13612	1032 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	KCNA4	P22459	653 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	TARS	P26639	723 aa	Known RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	AXL	P30530	894 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	CLK2	P49760	499 aa	Known RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	MTAP	Q13126	283 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	TARBP2	Q15633	366 aa	Known RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	CMTR1	Q8N1G2	835 aa	Known RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	C12orf50	Q8NA57	414 aa	Predicted RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	CCDC51	Q96ER9	411 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	PGBD1	Q96JS3	809 aa		13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	IPO9	Q96P70	1041 aa	Known RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	TDRD15	B5MCY1	1934 aa	Known RBP	13.7	□□□□□ -0.22
SBF1-208	ENST00000477234	CEP295	Q9C0D2	2601 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	SH2B2	O14492	632 aa	Predicted RBP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	DKC1	O60832	514 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	GAS7	O60861	476 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	CSDE1	O75534	798 aa	Known RBP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	EFEMP2	O95967	443 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	HSP90AA1	P07900	732 aa	Known RBP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	SPATA31D3	P0C874	917 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	CPA1	P15085	419 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	GNA11	P29992	359 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	CXCL12	P48061	93 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	RCAN1	P53805	252 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	ELAVL2	Q12926	359 aa	Known RBP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	AASDH	Q4L235	1098 aa	Predicted RBP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	PRR16	Q569H4	304 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	SPATA31D4	Q6ZUB0	917 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	BICD2	Q8TD16	824 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	BRF1	Q92994	677 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	MSANTD3	Q96H12	275 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	RPP25	Q9BUL9	199 aa	Known RBP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	C6orf50	Q9HD87	102 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	MARCH5	Q9NX47	278 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	FBXW11	Q9UKB1	542 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	ZMYM2	Q9UBW7	1377 aa		13.69	□□□□□ -0.22
SBF1-208	ENST00000477234	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	DOCK6	Q96HP0	2047 aa		13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	hCG_1642624	A0A1W2PR95	340 aa		13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	SOBP	A7XYQ1	873 aa		13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	MEIS3P2	A8K0S8	358 aa		13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	ASAP2	O43150	1006 aa		13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	ZNF862	O60290	1169 aa		13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	ERLIN2	O94905	339 aa		13.68	□□□□□ -0.22
SBF1-208	ENST00000477234	CIITA	P33076	1130 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms