RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PTPN22Q9Y2R2 807 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 KRT37O76014 449 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 MAPK4P31152 587 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 CEP55Q53EZ4 464 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 LRRC8BQ6P9F7 803 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 TAGAPQ8N103 731 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 ERGIC2Q96RQ1 377 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 MRPL47Q9HD33 250 aaKnown RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 NRBP2Q9NSY0 501 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 LRRIQ4A6NIV6 560 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 SOX5P35711 763 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 YWHAHQ04917 246 aaPredicted RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 SCARF1Q14162 830 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 BBS9Q3SYG4 887 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 LRRC24Q50LG9 513 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 CRLF3Q8IUI8 442 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 MTBPQ96DY7 904 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 IFT43Q96FT9 208 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 LAMB4A4D0S4 1761 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 FAM170AA1A519 330 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 ARHGEF37A1IGU5 675 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 H0Y626 953 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 H0YC42 278 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 SNX3O60493 162 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 DCTN3O75935 186 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 TRIM16O95361 564 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 ATP6V1C1P21283 382 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 RFC5P40937 340 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 LIFRP42702 1097 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 MMP13P45452 471 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 CAPRIN1Q14444 709 aaKnown RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 KHDRBS2Q5VWX1 349 aaKnown RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 APLFQ8IW19 511 aaPredicted RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 SNX19Q92543 992 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 GJA10Q969M2 543 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 NACC1Q96RE7 527 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 BLOC1S6Q9UL45 172 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 LMO7Q8WWI1 1683 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 OAS1P00973 400 aaKnown RBP12.21□□□□□ -0.45
U2AF1-209ENST00000475639 ITGA6P23229 1130 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 FBXW4P57775 412 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 FOXD4Q12950 439 aaPredicted RBP12.21□□□□□ -0.45
U2AF1-209ENST00000475639 ASTE1Q2TB18 679 aaPredicted RBP12.21□□□□□ -0.45
U2AF1-209ENST00000475639 TAF1BQ53T94 588 aaPredicted RBP12.21□□□□□ -0.45
U2AF1-209ENST00000475639 SLC17A8Q8NDX2 589 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 UIMC1Q96RL1 719 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 WDR64B1ANS9 1081 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 SMAPO00193 183 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
U2AF1-209ENST00000475639 PTGDRQ13258 359 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 KRT33BQ14525 404 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 ANO5Q75V66 913 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 NDUFAF2Q8N183 169 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 ZNF653Q96CK0 615 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 CNOT6LQ96LI5 555 aaKnown RBP12.21□□□□□ -0.45
U2AF1-209ENST00000475639 COG4Q9H9E3 785 aa12.21□□□□□ -0.45
U2AF1-209ENST00000475639 PPARGC1AQ9UBK2 798 aaKnown RBP12.21□□□□□ -0.45
U2AF1-209ENST00000475639 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 GYG2O15488 501 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.46
U2AF1-209ENST00000475639 SLC4A1P02730 911 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 TAC1P20366 129 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 ATP2B4P23634 1241 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 TCIRG1Q13488 830 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 FSCBQ5H9T9 825 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 OR52E8Q6IFG1 317 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 PI16Q6UXB8 463 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 ANKRD23Q86SG2 305 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 SLFN12Q8IYM2 578 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 ZSWIM5Q9P217 1185 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 INTUQ9ULD6 942 aa12.21□□□□□ -0.46
U2AF1-209ENST00000475639 IQANK1A0A1B0GTG1 560 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 ATP5HO75947 161 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 CASP7P55210 303 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 IL17AQ16552 155 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 C6orf118Q5T5N4 469 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 ARHGAP18Q8N392 663 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 OTUB1Q96FW1 271 aaPredicted RBP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 CALN1Q9BXU9 219 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 DLGAP2Q9P1A6 1054 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 MRPL11Q9Y3B7 192 aaKnown RBP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 AFDNP55196 1824 aaKnown RBP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 LRRC53A6NM62 1247 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 TMCC1O94876 653 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 STAG2Q8N3U4 1231 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 SLC26A7Q8TE54 656 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 MAML1Q92585 1016 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 MMTAG2Q9BU76 263 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms