RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 GSTCDQ8NEC7 633 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 RPGRIP1Q96KN7 1286 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 KIFC3Q9BVG8 833 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 PDZD7Q9H5P4 517 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 STK39Q9UEW8 545 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 STK24Q9Y6E0 443 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 ZMYM2Q9UBW7 1377 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 ACKR2O00590 384 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 N4BP3O15049 544 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 ABCB7O75027 752 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 EFEMP2O95967 443 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 SOD2P04179 222 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 LIG1P18858 919 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 ATP2C1P98194 919 aaPredicted RBP9.96□□□□□ -0.82
USF1-204ENST00000472217 ITIH3Q06033 890 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 GRIK3Q13003 919 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 TMEM132AQ24JP5 1023 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 RARS2Q5T160 578 aaKnown RBP9.96□□□□□ -0.82
USF1-204ENST00000472217 EEF1DP3Q658K8 133 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 TAS1R1Q7RTX1 841 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 KCNK18Q7Z418 384 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 RNF168Q8IYW5 571 aaPredicted RBP9.96□□□□□ -0.82
USF1-204ENST00000472217 TMEM87AQ8NBN3 555 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 DEPTORQ8TB45 409 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 SLC22A17Q8WUG5 538 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 KIFAP3Q92845 792 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 IFT74Q96LB3 600 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 KLHL5Q96PQ7 755 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 RPS6KC1Q96S38 1066 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 MMTAG2Q9BU76 263 aaKnown RBP9.96□□□□□ -0.82
USF1-204ENST00000472217 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 HERC2P3Q9BVR0 1158 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 DZANK1Q9NVP4 752 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 PARP2Q9UGN5 583 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 DNM3Q9UQ16 869 aa9.96□□□□□ -0.82
USF1-204ENST00000472217 C2CD2LO14523 706 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 PTGESO14684 152 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 LILRB3O75022 631 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 NR1I2O75469 434 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 URODP06132 367 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 CNPP09543 421 aaKnown RBP9.95□□□□□ -0.82
USF1-204ENST00000472217 WEE2P0C1S8 567 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 SP100P23497 879 aaPredicted RBP9.95□□□□□ -0.82
USF1-204ENST00000472217 CLCN4P51793 760 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 EFNA5P52803 228 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 MAPK7Q13164 816 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 CES5AQ6NT32 575 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 KANK3Q6NY19 840 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 DAW1Q8N136 415 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 C12orf76Q8N812 135 aaPredicted RBP9.95□□□□□ -0.82
USF1-204ENST00000472217 RABGGTAQ92696 567 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 ADPGKQ9BRR6 497 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 EMILIN2Q9BXX0 1053 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 ADAM7Q9H2U9 754 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 POMKQ9H5K3 350 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 MRPL17Q9NRX2 175 aaKnown RBP9.95□□□□□ -0.82
USF1-204ENST00000472217 SNTG2Q9NY99 539 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 CACNG4Q9UBN1 327 aa9.95□□□□□ -0.82
USF1-204ENST00000472217 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.95□□□□□ -0.82
USF1-204ENST00000472217 PLXNA3P51805 1871 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 DENND4AQ7Z401 1863 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 PHLPP2Q6ZVD8 1323 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 VWA3AA6NCI4 1184 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 HIP1RO75146 1068 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 RECQL4O94761 1208 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 KLRC2P26717 231 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 MTHFRP42898 656 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 NPTX2P47972 431 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 GLUD2P49448 558 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 PEX3P56589 373 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 ZRSR1Q15695 479 aaKnown RBP9.94□□□□□ -0.82
USF1-204ENST00000472217 NAB2Q15742 525 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 HYIQ5T013 277 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 NT5DC1Q5TFE4 455 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 ATF7IP2Q5U623 682 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 LARP1BQ659C4 914 aaKnown RBP9.94□□□□□ -0.82
USF1-204ENST00000472217 KIAA1841Q6NSI8 718 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 RINT1Q6NUQ1 792 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 FUT10Q6P4F1 479 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 CABP7Q86V35 215 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 PPFIBP1Q86W92 1011 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 FEZF2Q8TBJ5 459 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 EDAQ92838 391 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 B3GALT6Q96L58 329 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 DRC1Q96MC2 740 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 FBXL18Q96ME1 805 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 RIPOR3Q96MK2 946 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 PNMA5Q96PV4 448 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 PAAF1Q9BRP4 392 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 COLEC11Q9BWP8 271 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 GPR62Q9BZJ7 368 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 CXCL16Q9H2A7 254 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 ADAM28Q9UKQ2 775 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 HCN4Q9Y3Q4 1203 aa9.94□□□□□ -0.82
USF1-204ENST00000472217 CCDC169A6NNP5 214 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms