RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 POLD4Q9HCU8 107 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 STK39Q9UEW8 545 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 PARP2Q9UGN5 583 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 FAN1Q9Y2M0 1017 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 USP15Q9Y4E8 981 aaPredicted RBP11.22□□□□□ -0.61
SF3A3-204ENST00000462258 HCFC2Q9Y5Z7 792 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 CITO14578 2027 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 TRIP11Q15643 1979 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 CCDC169A6NNP5 214 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.61
SF3A3-204ENST00000462258 NRP1O14786 923 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 CLASP2O75122 1294 aaKnown RBP11.21□□□□□ -0.61
SF3A3-204ENST00000462258 RECQL4O94761 1208 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 SSBP05455 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
SF3A3-204ENST00000462258 NPTX2P47972 431 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 PEX3P56589 373 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 MAPK7Q13164 816 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 GIT2Q14161 759 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 PTPN14Q15678 1187 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 DCAF4L1Q3SXM0 396 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 TMEM119Q4V9L6 283 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 RINT1Q6NUQ1 792 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 ANKRD54Q6NXT1 300 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 CABP7Q86V35 215 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 DAW1Q8N136 415 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 CASP10Q92851 521 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 AK8Q96MA6 479 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 HERC2P3Q9BVR0 1158 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 TIPINQ9BVW5 301 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 C1QTNF1Q9BXJ1 281 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 MIOSQ9NXC5 875 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 USP20Q9Y2K6 914 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 IRAK3Q9Y616 596 aa11.21□□□□□ -0.61
SF3A3-204ENST00000462258 C2orf16Q68DN1 1984 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 NR1I2O75469 434 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 CXCL14O95715 111 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 SOD2P04179 222 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 ALDH2P05091 517 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 URODP06132 367 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 GUCY2CP25092 1073 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
SF3A3-204ENST00000462258 ATF7IP2Q5U623 682 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 EEF1DP3Q658K8 133 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 C1orf186Q6ZWK4 172 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 KCTD17Q8N5Z5 321 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 GSTCDQ8NEC7 633 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 SUSD6Q92537 303 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 INTS4Q96HW7 963 aaKnown RBP11.2□□□□□ -0.62
SF3A3-204ENST00000462258 PLIN2Q99541 437 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 APOL5Q9BWW9 433 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 EPHX3Q9H6B9 360 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 KMT5AQ9NQR1 393 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 SNTG2Q9NY99 539 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 ARHGAP28Q9P2N2 729 aa11.2□□□□□ -0.62
SF3A3-204ENST00000462258 F8W810 466 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 K7ERI5 159 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 SLC26A4O43511 780 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 PLA2G4BP0C869 781 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 HOXB8P17481 243 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 SYT1P21579 422 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 UBA7P41226 1012 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 SLC12A3P55017 1021 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 GRIN1Q05586 938 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 RAD51AP2Q09MP3 1159 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 RESTQ13127 1097 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 CBX2Q14781 532 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 ZNF568Q3ZCX4 644 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 NT5DC1Q5TFE4 455 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 SYCE2Q6PIF2 218 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 APBB1IPQ7Z5R6 666 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 RNF168Q8IYW5 571 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 SYT2Q8N9I0 419 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 RASSF8Q8NHQ8 419 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 CALML4Q96GE6 196 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 PHF7Q9BWX1 381 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 EMILIN2Q9BXX0 1053 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 MRPL4Q9BYD3 311 aaKnown RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 C17orf75Q9HAS0 396 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 MRPL17Q9NRX2 175 aaKnown RBP11.19□□□□□ -0.62
SF3A3-204ENST00000462258 DZANK1Q9NVP4 752 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 KCND2Q9NZV8 630 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 VWA8A3KMH1 1905 aa11.19□□□□□ -0.62
SF3A3-204ENST00000462258 CASTOR2A6NHX0 329 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 PI4K2BG5E9Z4 385 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 C2CD2LO14523 706 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 PTGESO14684 152 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 SLC16A4O15374 487 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 PLS3P13797 630 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 EPCAMP16422 314 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 LONP1P36776 959 aaKnown RBP11.18□□□□□ -0.62
SF3A3-204ENST00000462258 GLUD2P49448 558 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 CACNB1Q02641 598 aaPredicted RBP11.18□□□□□ -0.62
SF3A3-204ENST00000462258 TUSC3Q13454 348 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
SF3A3-204ENST00000462258 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
SF3A3-204ENST00000462258 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms