RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 MAPRE1Q15691 268 aaKnown RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 MPEG1Q2M385 716 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 PLEKHN1Q494U1 663 aaPredicted RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 CCDC70Q6NSX1 233 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 TMC6Q7Z403 805 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 AMIGO3Q86WK7 504 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 PPP1R3BQ86XI6 285 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 SUGP1Q8IWZ8 645 aaKnown RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 LILRA2Q8N149 483 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 LILRA3Q8N6C8 439 aaPredicted RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 PIK3C3Q8NEB9 887 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 IFI44Q8TCB0 444 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 MYLIPQ8WY64 445 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 NKD2Q969F2 451 aaPredicted RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 TBC1D20Q96BZ9 403 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 TMEM41AQ96HV5 264 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 TACO1Q9BSH4 297 aaKnown RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 ISCA1Q9BUE6 129 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 UNKQ9C0B0 810 aaKnown RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 ADAM7Q9H2U9 754 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 AS3MTQ9HBK9 375 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 COL20A1Q9P218 1284 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 ABCF2Q9UG63 623 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 DBR1Q9UK59 544 aaKnown RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 PADI4Q9UM07 663 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 CTNND2Q9UQB3 1225 aa5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 YBX2Q9Y2T7 364 aaKnown RBP5.1□□□□□ -1.59
HMGN3P1-201ENST00000453847 RPTORQ8N122 1335 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 FAM171A2A8MVW0 826 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ISM1B1AKI9 464 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 PRRT4C9JH25 899 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 DDX3XO00571 662 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ADAMTS3O15072 1205 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 NRP2O60462 931 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ADAMTS4O75173 837 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 IL18RAPO95256 599 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 AGR2O95994 175 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 RNASE1P07998 156 aaKnown RBP5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 FAM163BP0C2L3 166 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 HNRNPLP14866 589 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 VEGFAP15692 232 aaPredicted RBP5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 MALP21145 153 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 GLRBP48167 497 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 HSPA7P48741 367 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 FLT3LGP49771 235 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ARFIP2P53365 341 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ATP8B2P98198 1209 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 RASSF7Q02833 373 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 LMOD3Q0VAK6 560 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 DAG1Q14118 895 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 RAB3GAP1Q15042 981 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 PUM3Q15397 648 aaKnown RBP5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 CCDC38Q502W7 563 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 CCDC157Q569K6 752 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 VASNQ6EMK4 673 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 PPP4R3AQ6IN85 833 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ETV3LQ6ZN32 361 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 GLB1L2Q8IW92 636 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 MSL3Q8N5Y2 521 aaKnown RBP5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 PAF1Q8N7H5 531 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 SPATA5Q8NB90 893 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 SNX33Q8WV41 574 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 CCT6BQ92526 530 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 C18orf8Q96DM3 657 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 DYDC2Q96IM9 177 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ZC3H10Q96K80 434 aaKnown RBP5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 MSLNLQ96KJ4 702 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 PPP1R16BQ96T49 567 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 COLEC11Q9BWP8 271 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 ZNF287Q9HBT7 754 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 TDP1Q9NUW8 608 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 CPA4Q9UI42 421 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 DNAI1Q9UI46 699 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 PCDHA6Q9UN73 950 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 PCDHA1Q9Y5I3 950 aa5.09□□□□□ -1.59
HMGN3P1-201ENST00000453847 A0A1W2PPC4 97 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 A0A1W2PPL8 197 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 M0R3H8 397 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 PLA2G6O60733 806 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 PROCP04070 461 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 MPOP05164 745 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 LTA4HP09960 611 aaKnown RBP5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 GAAP10253 952 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 XPAP23025 273 aaPredicted RBP5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 SLC7A1P30825 629 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 SREBF1P36956 1147 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 YBX1P67809 324 aaKnown RBP5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 PDCD2Q16342 344 aaPredicted RBP5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 DGKDQ16760 1214 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 SLC35G1Q2M3R5 365 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 MST1LQ2TV78 715 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 C3orf38Q5JPI3 329 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 GGT6Q6P531 493 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 CD300LDQ6UXZ3 194 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 MMS22LQ6ZRQ5 1243 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 DTX1Q86Y01 620 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 STPG3Q8N7X2 389 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 TEX19Q8NA77 164 aa5.08□□□□□ -1.6
HMGN3P1-201ENST00000453847 IL17REQ8NFR9 667 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms