RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 C1orf162Q8NEQ5 155 aaPredicted RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 LRGUKQ96M69 825 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 ANKRD6Q9Y2G4 727 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 PTPN22Q9Y2R2 807 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 JCADQ9P266 1359 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 WASHC2AQ641Q2 1341 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 ADAMTS13Q76LX8 1427 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 AHDC1Q5TGY3 1603 aaPredicted RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 NRXN3Q9Y4C0 1643 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 NALCNQ8IZF0 1738 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 H7C1D1 291 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 K7ESM1 405 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 CREB3O43889 395 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PCDHGA12O60330 932 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 ZNF888P0CJ79 500 aaPredicted RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 SCAND1P57086 179 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 SESN3P58005 492 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 FAPQ12884 760 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 USP10Q14694 798 aaKnown RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 DDB1Q16531 1140 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 ARHGEF18Q6ZSZ5 1173 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 TSHZ1Q6ZSZ6 1077 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 CXXC5Q7LFL8 322 aaKnown RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 LIMS2Q7Z4I7 341 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 RTN4RL1Q86UN2 441 aaPredicted RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 REXO1L1PQ8IX06 675 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 WDR48Q8TAF3 677 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 FOXRED1Q96CU9 486 aaPredicted RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 ARPC5LQ9BPX5 153 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 SLC13A1Q9BZW2 595 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 OR10A5Q9H207 317 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PPP4R1LQ9P1A2 415 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PCDHGA9Q9Y5G4 932 aaKnown RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PCDHGA8Q9Y5G5 932 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PCDHGA7Q9Y5G6 932 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PCDHGA6Q9Y5G7 932 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PCDHGA3Q9Y5H0 932 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PCDHGA2Q9Y5H1 932 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 NHSL1Q5SYE7 1610 aa5.48□□□□□ -1.53
LINC00393-202ENST00000452852 RRBP1Q9P2E9 1410 aaKnown RBP5.48□□□□□ -1.53
LINC00393-202ENST00000452852 PPLO60437 1756 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 CUTAO60888 179 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 H2AFYO75367 372 aaKnown RBP5.47□□□□□ -1.53
LINC00393-202ENST00000452852 SLC9A1P19634 815 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 RECQLP46063 649 aaPredicted RBP5.47□□□□□ -1.53
LINC00393-202ENST00000452852 IL31Q6EBC2 164 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 SAMD3Q8N6K7 520 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 KIAA1958Q8N8K9 716 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 CLIP3Q96DZ5 547 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 PTPN18Q99952 460 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 SSBP3Q9BWW4 388 aaPredicted RBP5.47□□□□□ -1.53
LINC00393-202ENST00000452852 CARD11Q9BXL7 1154 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 PCGF6Q9BYE7 350 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 ZDHHC5Q9C0B5 715 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 TCF7L1Q9HCS4 588 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 JADE2Q9NQC1 790 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 ANLNQ9NQW6 1124 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 ACSS2Q9NR19 701 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 TOPORSQ9NS56 1045 aaPredicted RBP5.47□□□□□ -1.53
LINC00393-202ENST00000452852 MKS1Q9NXB0 559 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 DDX20Q9UHI6 824 aaKnown RBP5.47□□□□□ -1.53
LINC00393-202ENST00000452852 CDC42EP3Q9UKI2 254 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 NEXMIFQ5QGS0 1516 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 DCCP43146 1447 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 SPATA31A6Q5VVP1 1343 aa5.47□□□□□ -1.53
LINC00393-202ENST00000452852 LCHNA4D1U4 455 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 GOLGA8AA7E2F4 631 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 GOLGA8BA8MQT2 603 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 XPOTO43592 962 aaKnown RBP5.46□□□□□ -1.54
LINC00393-202ENST00000452852 CNOT4O95628 575 aaKnown RBP5.46□□□□□ -1.54
LINC00393-202ENST00000452852 RBP3P10745 1247 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 ETV4P43268 484 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 FNTBP49356 437 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 KCNQ1P51787 676 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 NEK3P51956 506 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 EPHB4P54760 987 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 RRADP55042 308 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 MOGSQ13724 837 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 SAFB2Q14151 953 aaKnown RBP eCLIP5.46□□□□□ -1.54
LINC00393-202ENST00000452852 LRRC32Q14392 662 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 GRM3Q14832 879 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 ZNF174Q15697 407 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 MINDY4Q4G0A6 757 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 GLB1LQ6UWU2 654 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 EPM2AIP1Q7L775 607 aaPredicted RBP5.46□□□□□ -1.54
LINC00393-202ENST00000452852 OTOP2Q7RTS6 562 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 EFHBQ8N7U6 833 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 CALML6Q8TD86 181 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 EVI5LQ96CN4 794 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 RGS17Q9UGC6 210 aaPredicted RBP5.46□□□□□ -1.54
LINC00393-202ENST00000452852 FBXO10Q9UK96 956 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.54
LINC00393-202ENST00000452852 PNMA8BQ9ULN7 279 aaPredicted RBP5.46□□□□□ -1.54
LINC00393-202ENST00000452852 GIT1Q9Y2X7 761 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 SLC4A7Q9Y6M7 1214 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 ASXL1Q8IXJ9 1541 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms