RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 CBX2Q14781 532 aaPredicted RBP21.4■■□□□ 1.02
USP40-207ENST00000450940 PTPN14Q15678 1187 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 RINT1Q6NUQ1 792 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 LLGL2Q6P1M3 1020 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 C1orf186Q6ZWK4 172 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 SLC22A17Q8WUG5 538 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 PNMA5Q96PV4 448 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 APOL6Q9BWW8 343 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 PHF7Q9BWX1 381 aaPredicted RBP21.4■■□□□ 1.02
USP40-207ENST00000450940 DCXO43602 365 aa21.39■■□□□ 1.01
USP40-207ENST00000450940 MAPK7Q13164 816 aa21.39■■□□□ 1.01
USP40-207ENST00000450940 TPRNQ4KMQ1 711 aa21.39■■□□□ 1.01
USP40-207ENST00000450940 TMEM31Q5JXX7 168 aa21.39■■□□□ 1.01
USP40-207ENST00000450940 BRAPQ7Z569 592 aa21.39■■□□□ 1.01
USP40-207ENST00000450940 LRFN3Q9BTN0 628 aa21.39■■□□□ 1.01
USP40-207ENST00000450940 MYH11P35749 1972 aa21.39■■□□□ 1.01
USP40-207ENST00000450940 TRIOO75962 3097 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 VWA3AA6NCI4 1184 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 SLC26A4O43511 780 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 SOD2P04179 222 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 COL9A1P20849 921 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 OR1G1P47890 313 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 GRIK3Q13003 919 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 NT5DC1Q5TFE4 455 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 EEF1DP3Q658K8 133 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 KIFC3Q9BVG8 833 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 RUSC1Q9BVN2 902 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 TIPINQ9BVW5 301 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 NT5C3AQ9H0P0 336 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 C17orf75Q9HAS0 396 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 PARP2Q9UGN5 583 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 USP20Q9Y2K6 914 aa21.38■■□□□ 1.01
USP40-207ENST00000450940 K7ERI5 159 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 HIP1RO75146 1068 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 NR1I2O75469 434 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 GUCY2CP25092 1073 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 NPTX2P47972 431 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 ITIH3Q06033 890 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 HERC4Q5GLZ8 1057 aaPredicted RBP21.37■■□□□ 1.01
USP40-207ENST00000450940 PPFIBP1Q86W92 1011 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 RNF135Q8IUD6 432 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 SYT2Q8N9I0 419 aaPredicted RBP21.37■■□□□ 1.01
USP40-207ENST00000450940 AK8Q96MA6 479 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 DRC1Q96MC2 740 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 ADPGKQ9BRR6 497 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 NTPCRQ9BSD7 190 aaKnown RBP21.37■■□□□ 1.01
USP40-207ENST00000450940 HERC2P3Q9BVR0 1158 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 COLEC11Q9BWP8 271 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 ADAM7Q9H2U9 754 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 TMEM134Q9H6X4 195 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 DZANK1Q9NVP4 752 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 KLK14Q9P0G3 267 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 ARHGAP28Q9P2N2 729 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 PRG3Q9Y2Y8 225 aaPredicted RBP21.37■■□□□ 1.01
USP40-207ENST00000450940 TRIP11Q15643 1979 aa21.37■■□□□ 1.01
USP40-207ENST00000450940 BMP15O95972 392 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 CA8P35219 290 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 PEX3P56589 373 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 DCAF4L1Q3SXM0 396 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 TMEM119Q4V9L6 283 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 KIAA0319Q5VV43 1072 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 TAS1R1Q7RTX1 841 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 GPR65Q8IYL9 337 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 KLHL5Q96PQ7 755 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 MRPL17Q9NRX2 175 aaKnown RBP21.36■■□□□ 1.01
USP40-207ENST00000450940 CHST7Q9NS84 486 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 SNTG2Q9NY99 539 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 TNFSF13BQ9Y275 285 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 SSX2IPQ9Y2D8 614 aa21.36■■□□□ 1.01
USP40-207ENST00000450940 RBM19Q9Y4C8 960 aaKnown RBP21.36■■□□□ 1.01
USP40-207ENST00000450940 PHLPP2Q6ZVD8 1323 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 PTGESO14684 152 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 CNPP09543 421 aaKnown RBP21.35■■□□□ 1.01
USP40-207ENST00000450940 EPCAMP16422 314 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 PDCP20941 246 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 ATF7IP2Q5U623 682 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 TMEM87AQ8NBN3 555 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 RPS6KC1Q96S38 1066 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 EMILIN2Q9BXX0 1053 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 RXFP1Q9HBX9 757 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 KCND2Q9NZV8 630 aa21.35■■□□□ 1.01
USP40-207ENST00000450940 CCDC169A6NNP5 214 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 F8W810 466 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 RECQL4O94761 1208 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 LIG1P18858 919 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 CLCN4P51793 760 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 SLC12A3P55017 1021 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 DSG1Q02413 1049 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 DMP1Q13316 513 aaPredicted RBP21.34■■□□□ 1.01
USP40-207ENST00000450940 MAPK8IP2Q13387 824 aaPredicted RBP21.34■■□□□ 1.01
USP40-207ENST00000450940 TUSC3Q13454 348 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 NAB2Q15742 525 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 TMEM132AQ24JP5 1023 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 CES5AQ6NT32 575 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 TAS1R3Q7RTX0 852 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 SPIRE2Q8WWL2 714 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 INTS4Q96HW7 963 aaKnown RBP21.34■■□□□ 1.01
USP40-207ENST00000450940 NECTIN4Q96NY8 510 aa21.34■■□□□ 1.01
USP40-207ENST00000450940 ACO2Q99798 780 aaKnown RBP21.34■■□□□ 1.01
USP40-207ENST00000450940 APOL5Q9BWW9 433 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms