RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 KIFC3Q9BVG8 833 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 ST6GALNAC4Q9H4F1 302 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 PDZD7Q9H5P4 517 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 MRPL44Q9H9J2 332 aaKnown RBP13.44□□□□□ -0.26
LTBR-204ENST00000444814 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
LTBR-204ENST00000444814 MYH15Q9Y2K3 1946 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 HNRNPDLO14979 420 aaKnown RBP13.43□□□□□ -0.26
LTBR-204ENST00000444814 CLDN3O15551 220 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 B4GALT5O43286 388 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 SLC34A2O95436 690 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 SLFN14P0C7P3 912 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 SYKP43405 635 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 ASIC1P78348 528 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 UBXN11Q5T124 520 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 MPZL3Q6UWV2 235 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 MRPL38Q96DV4 380 aaKnown RBP13.43□□□□□ -0.26
LTBR-204ENST00000444814 ACO2Q99798 780 aaKnown RBP13.43□□□□□ -0.26
LTBR-204ENST00000444814 TMEM175Q9BSA9 504 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 APOL6Q9BWW8 343 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 OLFML3Q9NRN5 406 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 TYW1Q9NV66 732 aaKnown RBP13.43□□□□□ -0.26
LTBR-204ENST00000444814 KBTBD4Q9NVX7 518 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 SPG21Q9NZD8 308 aa13.43□□□□□ -0.26
LTBR-204ENST00000444814 NPHP3-ACAD11A0A0J9YXS1 232 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 NCK2O43639 380 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 OFD1O75665 1012 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 ATF7P17544 494 aaPredicted RBP13.42□□□□□ -0.26
LTBR-204ENST00000444814 POSTNQ15063 836 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 CLLU1OSQ5K130 101 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 CNNM4Q6P4Q7 775 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 COLGALT1Q8NBJ5 622 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 MAFAQ8NHW3 353 aaPredicted RBP13.42□□□□□ -0.26
LTBR-204ENST00000444814 LPPQ93052 612 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 EIF2AQ9BY44 585 aaKnown RBP13.42□□□□□ -0.26
LTBR-204ENST00000444814 TMEM206Q9H813 350 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 POLD4Q9HCU8 107 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 TBX20Q9UMR3 447 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
LTBR-204ENST00000444814 MYMKA6NI61 221 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 INPPL1O15357 1258 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 GCNT3O95395 438 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 ALDH2P05091 517 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 PFKFB1P16118 471 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 GTF2BQ00403 316 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 GRIK3Q13003 919 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 NOLC1Q14978 699 aaKnown RBP eCLIP13.41□□□□□ -0.26
LTBR-204ENST00000444814 E2F4Q16254 413 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 KCNT2Q6UVM3 1135 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 AGMOQ6ZNB7 445 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 SFR1Q86XK3 245 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 SYCP3Q8IZU3 236 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 FSIP1Q8NA03 581 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 SMG8Q8ND04 991 aaKnown RBP13.41□□□□□ -0.26
LTBR-204ENST00000444814 ACCSQ96QU6 501 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 TSPAN18Q96SJ8 248 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 C7orf25Q9BPX7 421 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
LTBR-204ENST00000444814 TRIM9Q9C026 710 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 NXF3Q9H4D5 531 aaKnown RBP13.41□□□□□ -0.26
LTBR-204ENST00000444814 SLC38A7Q9NVC3 462 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 PVALEFA0A1B0GWK0 134 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 ARL5CA6NH57 179 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 ZC3H11AO75152 810 aaKnown RBP eCLIP13.41□□□□□ -0.26
LTBR-204ENST00000444814 KIF20AO95235 890 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 MLH1P40692 756 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 GRM5P41594 1212 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 GATMP50440 423 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 PLCB3Q01970 1234 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 NT5DC1Q5TFE4 455 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 GDPD5Q8WTR4 605 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 ACAP3Q96P50 834 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 GAD1Q99259 594 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 COLEC11Q9BWP8 271 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 SSX2IPQ9Y2D8 614 aa13.41□□□□□ -0.26
LTBR-204ENST00000444814 A0A087X0B3 334 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 KIAA0391O15091 583 aaKnown RBP13.4□□□□□ -0.26
LTBR-204ENST00000444814 XPOTO43592 962 aaKnown RBP13.4□□□□□ -0.26
LTBR-204ENST00000444814 FGF18O76093 207 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 PIGRP01833 764 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 THP07101 528 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 SKIV2LQ15477 1246 aaKnown RBP13.4□□□□□ -0.26
LTBR-204ENST00000444814 LONRF3Q496Y0 759 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 UNC13DQ70J99 1090 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 ZNF720Q7Z2F6 126 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 MICALL1Q8N3F8 863 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 KLHL23Q8NBE8 558 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 MICAL1Q8TDZ2 1067 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 DNAJC19Q96DA6 116 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 GTPBP4Q9BZE4 634 aaKnown RBP13.4□□□□□ -0.26
LTBR-204ENST00000444814 GBP3Q9H0R5 595 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 NSUN3Q9H649 340 aaKnown RBP13.4□□□□□ -0.26
LTBR-204ENST00000444814 CWH43Q9H720 699 aa13.4□□□□□ -0.26
LTBR-204ENST00000444814 NGRNQ9NPE2 291 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms