RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 ZNF34Q8IZ26 560 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 LRRC57Q8N9N7 239 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 RAPGEF5Q92565 580 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 CUL5Q93034 780 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 CHMP6Q96FZ7 201 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 PGM2Q96G03 612 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 MS4A14Q96JA4 679 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 MPP4Q96JB8 637 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 KRT12Q99456 494 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 TMEM109Q9BVC6 243 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 TRIM6Q9C030 488 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 TCP11L1Q9NUJ3 509 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 PCDHA6Q9UN73 950 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 PCDHA8Q9Y5H6 950 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 COL4A5P29400 1685 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 CCT8L1PA6NM43 557 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 NKRFO15226 690 aaKnown RBP eCLIP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 PPFIA2O75334 1257 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 NOL4O94818 638 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 RASGRP1O95267 797 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 GNA14O95837 355 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 HNRNPCP07910 306 aaKnown RBP eCLIP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 CTSHP09668 335 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 KLRC1P26715 233 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 CTNNA1P35221 906 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 MMP13P45452 471 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 DRG2P55039 364 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 SOX10P56693 466 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 CCDC178Q5BJE1 867 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 TNFAIP8L3Q5GJ75 292 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 MAATS1Q7Z4T9 603 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 TMC3Q7Z5M5 1100 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 CABP7Q86V35 215 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 DDX42Q86XP3 938 aaKnown RBP eCLIP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 SIX5Q8N196 739 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 IFT81Q8WYA0 676 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 HVCN1Q96D96 273 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 PAWRQ96IZ0 340 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 RSRC1Q96IZ7 334 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 MMTAG2Q9BU76 263 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 C2orf49Q9BVC5 232 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 FAM129AQ9BZQ8 928 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 NYXQ9GZU5 481 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 ZMYND12Q9H0C1 365 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 PPANQ9NQ55 473 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 FAM114A2Q9NRY5 505 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 SAGE1Q9NXZ1 904 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 GPRC5DQ9NZD1 345 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 CNOT8Q9UFF9 292 aaKnown RBP8.69□□□□□ -1.02
VTI1A-202ENST00000432306 GGT7Q9UJ14 662 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 FBXL5Q9UKA1 691 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 DAAM1Q9Y4D1 1078 aa8.69□□□□□ -1.02
VTI1A-202ENST00000432306 F8VZ95 297 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ADAMTS3O15072 1205 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 OR52Z1P0C646 297 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 PDHBP11177 359 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 FCER1AP12319 257 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 HTR3AP46098 478 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ST13P50502 369 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 RAB27AP51159 221 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 GUCY2FP51841 1108 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ASIC1P78348 528 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 CLDN10P78369 228 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 TKFCQ3LXA3 575 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 SFMBT2Q5VUG0 894 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 DESI1Q6ICB0 168 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 CACNA2D4Q7Z3S7 1137 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 UBE2Q1Q7Z7E8 422 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ADGRA1Q86SQ6 560 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 RPGRQ92834 1020 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 XPO6Q96QU8 1125 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 USB1Q9BQ65 265 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 FAM126AQ9BYI3 521 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 VPS33BQ9H267 617 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 NOD2Q9HC29 1040 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 HOMER3Q9NSC5 361 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 FAM207AQ9NSI2 230 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 HAUS2Q9NVX0 235 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 BARHL2Q9NY43 387 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ZIM2Q9NZV7 527 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 BZW2Q9Y6E2 419 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 hCG_1642624A0A1W2PR95 340 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ESYT2A0FGR8 921 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 PP2D1A8MPX8 630 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 PGRMC1O00264 195 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 SART1O43290 800 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 BUB1O43683 1085 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 CYP7A1P22680 504 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 SMARCA1P28370 1054 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 PRKCIP41743 596 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 MRPS25P82663 173 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 PURAQ00577 322 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 GRM4Q14833 912 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 NR6A1Q15406 480 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 RPS6KA1Q15418 735 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 HLFQ16534 295 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 CRY2Q49AN0 593 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms