RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PRDM12Q9H4Q4 367 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 EVLQ9UI08 416 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 RIMS1Q86UR5 1692 aaKnown RBP6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 SETD1BQ9UPS6 1966 aaKnown RBP6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 RPS6KA4O75676 772 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 ID4P47928 161 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 DUSP2Q05923 314 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 UBE3CQ15386 1083 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 CT83Q5H943 113 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 RABL3Q5HYI8 236 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 HTR3DQ70Z44 454 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 RNF180Q86T96 592 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 SLC41A1Q8IVJ1 513 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 GLB1L2Q8IW92 636 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 AMER2Q8N7J2 671 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 UBR7Q8N806 425 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 LARP4BQ92615 738 aaKnown RBP6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 IFT22Q9H7X7 185 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 ABCA9Q8IUA7 1624 aa6.82□□□□□ -1.32
HMGB3P5-201ENST00000428894 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 NEMP1O14524 444 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 ZEB2O60315 1214 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 LPLP06858 475 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 MRPL49Q13405 166 aaKnown RBP6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 PITRM1Q5JRX3 1037 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 THNSL2Q86YJ6 484 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 OR14C36Q8NHC7 312 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 IL17RAQ96F46 866 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 TTC1Q99614 292 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 SLITRK6Q9H5Y7 841 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 CTTNBP2Q8WZ74 1663 aa6.81□□□□□ -1.32
HMGB3P5-201ENST00000428894 FANCAO15360 1455 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 ATP10BO94823 1461 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 LTA4HP09960 611 aaKnown RBP6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 DPTQ07507 201 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 STRN3Q13033 797 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 PDCD1Q15116 288 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 DCAF17Q5H9S7 520 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 NAIF1Q69YI7 327 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 HDGFL2Q7Z4V5 671 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 FAM83AQ86UY5 434 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 CHFRQ96EP1 664 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 MENTQ9BUN1 341 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 SLKQ9H2G2 1235 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 KCTD10Q9H3F6 313 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 NRDE2Q9H7Z3 1164 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 TOPORSQ9NS56 1045 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 GPRC5BQ9NZH0 403 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 TRPS1Q9UHF7 1281 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 YEATS2Q9ULM3 1422 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
HMGB3P5-201ENST00000428894 DENND4BO75064 1496 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 SPATA31D1Q6ZQQ2 1576 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 AKNAQ7Z591 1439 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 PRAMEF4O60810 478 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 DNAJC6O75061 913 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 ULK1O75385 1050 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 GZMKP49863 264 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 LGALS4P56470 323 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 WNT3AP56704 352 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 UGT8Q16880 541 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 GIMAP6Q6P9H5 292 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 STRA8Q7Z7C7 330 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 CLRN3Q8NCR9 226 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 SLC25A43Q8WUT9 341 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 EAF2Q96CJ1 260 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 PDCD2LQ9BRP1 358 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 SORCS3Q9UPU3 1222 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 CDY2AQ9Y6F7 541 aa6.79□□□□□ -1.32
HMGB3P5-201ENST00000428894 PLEKHD1A6NEE1 506 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 GRXCR1A8MXD5 290 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 GYPEP15421 78 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 HSD3B2P26439 372 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 SESN3P58005 492 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 ABHD15Q6UXT9 468 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 ZNF627Q7L945 461 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 ZNF276Q8N554 614 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 GLB1L3Q8NCI6 653 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 HAS1Q92839 578 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 IKZF4Q9H2S9 585 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 CAAP1Q9H8G2 361 aa6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
HMGB3P5-201ENST00000428894 WDR33Q9C0J8 1336 aaKnown RBP6.77□□□□□ -1.32
HMGB3P5-201ENST00000428894 FHOD3Q2V2M9 1422 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 PTGS2P35354 604 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 MEF2AQ02078 507 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 APBA1Q02410 837 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 C19orf54Q5BKX5 351 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 METTL24Q5JXM2 366 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 SDE2Q6IQ49 451 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 XYLT1Q86Y38 959 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 OR52N2Q8NGI0 321 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 CPT1CQ8TCG5 803 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 CEP89Q96ST8 783 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 LSM14BQ9BX40 385 aaKnown RBP6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 CPEB1Q9BZB8 566 aaKnown RBP6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 EDARQ9UNE0 448 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 APOBEC2Q9Y235 224 aaKnown RBP6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 MAGI2Q86UL8 1455 aa6.77□□□□□ -1.33
HMGB3P5-201ENST00000428894 PREX1Q8TCU6 1659 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms