RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 FOXR2Q6PJQ5 311 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 MIGA2Q7L4E1 593 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 EPM2AIP1Q7L775 607 aaPredicted RBP17.8■□□□□ 0.44
PKP4-204ENST00000421462 C4orf33Q8N1A6 199 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 WDR66Q8TBY9 1149 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
PKP4-204ENST00000421462 TXLNGQ9NUQ3 528 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 MTMR4Q9NYA4 1195 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 PCDHA1Q9Y5I3 950 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 SNED1Q8TER0 1413 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 ITGB4P16144 1822 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 KIAA1551Q9HCM1 1747 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 A6NHS1 94 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 EXOC3O60645 756 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 CALCAP01258 141 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 ARHGEF18Q6ZSZ5 1173 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 SYCP3Q8IZU3 236 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 DTX3LQ8TDB6 740 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 TBC1D10AQ9BXI6 508 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 ANO3Q9BYT9 981 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 DNAJC5Q9H3Z4 198 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 ETAA1Q9NY74 926 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 APEX2Q9UBZ4 518 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 PCDHA3Q9Y5H8 950 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 PIAS1O75925 651 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 TAC1P20366 129 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 IKQ13123 557 aaPredicted RBP17.8■□□□□ 0.44
PKP4-204ENST00000421462 NFIXQ14938 502 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 C2CD6Q53TS8 623 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
PKP4-204ENST00000421462 STK32AQ8WU08 396 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 GPR88Q9GZN0 384 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 ANKRD2Q9GZV1 360 aa17.8■□□□□ 0.44
PKP4-204ENST00000421462 PITPNM2Q9BZ72 1349 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 LAMB1P07942 1786 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 O00370 1275 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 TTLL1O95922 423 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 PECAM1P16284 738 aaPredicted RBP17.79■□□□□ 0.44
PKP4-204ENST00000421462 ATP5DP30049 168 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 GSTO1P78417 241 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 SERPINB12Q96P63 405 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 DCTN4Q9UJW0 460 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 CHKBQ9Y259 395 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 FRMD4BQ9Y2L6 1034 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 C2CD2Q9Y426 696 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 SHANK3Q9BYB0 1731 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 TISP43B9A030 160 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 LDHCP07864 332 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 TPBGLP0DKB5 382 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 BRD2P25440 801 aaKnown RBP17.79■□□□□ 0.44
PKP4-204ENST00000421462 CTNNA2P26232 953 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 GPC5P78333 572 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 MFSD5Q6N075 450 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 FAM43BQ6ZT52 329 aaPredicted RBP17.79■□□□□ 0.44
PKP4-204ENST00000421462 RHOT2Q8IXI1 618 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 ERMNQ8TAM6 284 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 NUP85Q9BW27 656 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 ROPN1BQ9BZX4 212 aaPredicted RBP17.79■□□□□ 0.44
PKP4-204ENST00000421462 ROPN1Q9HAT0 212 aaPredicted RBP17.79■□□□□ 0.44
PKP4-204ENST00000421462 PRKAG3Q9UGI9 489 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 PHTF1Q9UMS5 762 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 RABGAP1Q9Y3P9 1069 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.79■□□□□ 0.44
PKP4-204ENST00000421462 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
PKP4-204ENST00000421462 SPATA31C1P0DKV0 1188 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 ZNF76P36508 570 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 DLG4P78352 724 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 STRN3Q13033 797 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 MTFR1Q15390 333 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 TRMT10CQ7L0Y3 403 aaKnown RBP17.78■□□□□ 0.44
PKP4-204ENST00000421462 ZC3H3Q8IXZ2 948 aaKnown RBP17.78■□□□□ 0.44
PKP4-204ENST00000421462 SYT2Q8N9I0 419 aaPredicted RBP17.78■□□□□ 0.44
PKP4-204ENST00000421462 DNAJC9Q8WXX5 260 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 RTFDC1Q9BY42 306 aaPredicted RBP17.78■□□□□ 0.44
PKP4-204ENST00000421462 CYP39A1Q9NYL5 469 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 ANAPC5Q9UJX4 755 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 TTC4O95801 387 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
PKP4-204ENST00000421462 GCLMP48507 274 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 PEX5P50542 639 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 ICA1Q05084 483 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 ARHGEF19Q8IW93 802 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 MIF4GDA9UHW6 222 aaKnown RBP17.78■□□□□ 0.44
PKP4-204ENST00000421462 SGPL1O95470 568 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 KRT15P19012 456 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 RWDD2BP57060 319 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 IL9RQ01113 521 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 HS2ST1Q7LGA3 356 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 MAGEB18Q96M61 343 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 DENND2DQ9H6A0 471 aaPredicted RBP17.78■□□□□ 0.44
PKP4-204ENST00000421462 IRAK4Q9NWZ3 460 aa17.78■□□□□ 0.44
PKP4-204ENST00000421462 A0A1B0GVG6 124 aa17.77■□□□□ 0.44
PKP4-204ENST00000421462 FAM196BA6NMK8 535 aa17.77■□□□□ 0.44
PKP4-204ENST00000421462 SSR1P43307 286 aaKnown RBP17.77■□□□□ 0.44
PKP4-204ENST00000421462 WDR4P57081 412 aaKnown RBP17.77■□□□□ 0.44
PKP4-204ENST00000421462 KLC1Q07866 573 aa17.77■□□□□ 0.44
PKP4-204ENST00000421462 ZNF543Q08ER8 600 aa17.77■□□□□ 0.44
PKP4-204ENST00000421462 MTM1Q13496 603 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms