RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 LTBRP36941 435 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 NRIP1P48552 1158 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 RAB27AP51159 221 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 MMP16P51512 607 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 USP46P62068 366 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 ATP2C1P98194 919 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 CUL4AQ13619 759 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 TFDP1Q14186 410 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 AAK1Q2M2I8 961 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 NAALADL2Q58DX5 795 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 RILPL1Q5EBL4 403 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 NOMO2Q5JPE7 1267 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 PLPP4Q5VZY2 271 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 HAUS3Q68CZ6 603 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 GLB1LQ6UWU2 654 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 DTHD1Q6ZMT9 781 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 FAM43BQ6ZT52 329 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 TMEM173Q86WV6 379 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 IGSF22Q8N9C0 903 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 SMG8Q8ND04 991 aaKnown RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 MICAL1Q8TDZ2 1067 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 BCL7CQ8WUZ0 217 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 SYMPKQ92797 1274 aaKnown RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 PABPC5Q96DU9 382 aaKnown RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 PLIN2Q99541 437 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 MMTAG2Q9BU76 263 aaKnown RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 KIFC3Q9BVG8 833 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 TRAIPQ9BWF2 469 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 APOL6Q9BWW8 343 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 TBC1D13Q9NVG8 400 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 DNAJB4Q9UDY4 337 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 HES2Q9Y543 173 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 IPPQ9Y573 584 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 HIDE1A8MVS5 230 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 FSCN2O14926 492 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZNF623O75123 536 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 TBX10O75333 385 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 OFD1O75665 1012 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 DDHD2O94830 711 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 NPTXRO95502 500 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 POMCP01189 267 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 SKIP12755 728 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 ITGA4P13612 1032 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 PRPHP41219 470 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 SLC11A1P49279 550 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 BCAR1P56945 870 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 GRIN1Q05586 938 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 RNASELQ05823 741 aaKnown RBP6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 FOXC1Q12948 553 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 PDIA5Q14554 519 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 COL19A1Q14993 1142 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 LEXMQ3ZCV2 418 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 KRT79Q5XKE5 535 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 PTCRAQ6ISU1 281 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 FAM173BQ6P4H8 233 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 MRPL10Q7Z7H8 261 aaKnown RBP6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZNF280BQ86YH2 543 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 SLC39A11Q8N1S5 342 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 MCPH1Q8NEM0 835 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 VN1R2Q8NFZ6 395 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 AUTS2Q8WXX7 1259 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 MRPS27Q92552 414 aaKnown RBP6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 PGBD4Q96DM1 585 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 PNMA5Q96PV4 448 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 GAD1Q99259 594 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 TCF25Q9BQ70 676 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 RUSC1Q9BVN2 902 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 MRPL9Q9BYD2 267 aaKnown RBP6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 RAB34Q9BZG1 259 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 CSRNP2Q9H175 543 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 NXF3Q9H4D5 531 aaKnown RBP6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 NRDE2Q9H7Z3 1164 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 TLE6Q9H808 572 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 RSAD1Q9HA92 442 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 CD320Q9NPF0 282 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 ENTPD7Q9NQZ7 604 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 TLR9Q9NR96 1032 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 TOR4AQ9NXH8 423 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 SPG21Q9NZD8 308 aa6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 BARX2Q9UMQ3 279 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P20-201ENST00000402555 ARL5CA6NH57 179 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 SFI1A8K8P3 1242 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 F8W810 466 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 LAD1O00515 517 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 DXOO77932 396 aaKnown RBP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 EYA4O95677 639 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 GLP2RO95838 553 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 SSBP05455 408 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 PRKCBP05771 671 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 GALTP07902 379 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 NCLP19338 710 aaKnown RBP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 SYT1P21579 422 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 MUTP22033 750 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 AKAP5P24588 427 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CA8P35219 290 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 PPM1AP35813 382 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 MLH1P40692 756 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 ALDH7A1P49419 539 aaKnown RBP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 NDUFV1P49821 464 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms