RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 XPO6Q96QU8 1125 aaKnown RBP13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 TACO1Q9BSH4 297 aaKnown RBP13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 CARD9Q9H257 536 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 GABBR1Q9UBS5 961 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 TNRC6CQ9HCJ0 1690 aaKnown RBP13.58□□□□□ -0.23
PPP4R1-202ENST00000400555 LRRIQ4A6NIV6 560 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 RGL2O15211 777 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 DDX3YO15523 660 aaKnown RBP13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 PIAS1O75925 651 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 RARAP10276 462 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 NEFHP12036 1026 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 CNGA1P29973 690 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 RPS6P62753 249 aaKnown RBP13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 SLC27A3Q5K4L6 730 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 NUGGCQ68CJ6 796 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 SWSAP1Q6NVH7 229 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 ARHGAP27Q6ZUM4 889 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 KIFAP3Q92845 792 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 HVCN1Q96D96 273 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 SERPINA10Q9UK55 444 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 RWDD2BP57060 319 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 KRT17Q04695 432 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 TTC27Q6P3X3 843 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 SLC5A5Q92911 643 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 ZSWIM1Q9BR11 485 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 TMEM59LQ9UK28 342 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 NAV1Q8NEY1 1877 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 EIF4E1BA6NMX2 242 aaKnown RBP13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 GOLGA8SH3BPF8 625 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 GOLGA8MH3BSY2 632 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 CREB1P16220 341 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 RARRES1P49788 294 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 SEL1LQ9UBV2 794 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 TMX2Q9Y320 296 aa13.58□□□□□ -0.24
PPP4R1-202ENST00000400555 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 DDX60LQ5H9U9 1706 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 PHF2O75151 1096 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 DYNLT1P63172 113 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 SPP2Q13103 211 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 SPRED3Q2MJR0 410 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 SYCP2LQ5T4T6 812 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 SRRM1Q8IYB3 904 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 MREGQ8N565 214 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 RTN2O75298 545 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 SCP2P22307 547 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 CTNNA2P26232 953 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 LIG4P49917 911 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 OSTNP61366 133 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 MBOAT7Q96N66 472 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 PABPC3Q9H361 631 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 SLC40A1Q9NP59 571 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 SYNGAP1Q96PV0 1343 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 TKFCQ3LXA3 575 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 WDR78Q5VTH9 848 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 KIRREL3Q8IZU9 778 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 PLEKHO2Q8TD55 490 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 ARHGEF2Q92974 986 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 LBHD1Q9BQE6 289 aaPredicted RBP13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 MKNK1Q9BUB5 465 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 C1orf112Q9NSG2 853 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 ODF2LQ9ULJ1 636 aa13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-202ENST00000400555 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 PLS3P13797 630 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 TMEM270Q6UE05 265 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 TMEM143Q96AN5 459 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 KREMEN1Q96MU8 473 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 CHST7Q9NS84 486 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 STXBP5LQ9Y2K9 1186 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 FRMPD4Q14CM0 1322 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 RRM1P23921 792 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 CHRNA3P32297 505 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 PPATQ06203 517 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 PPP2R5CQ13362 524 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 BMT2Q1RMZ1 405 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 KRT39Q6A163 491 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 SLC13A5Q86YT5 568 aaPredicted RBP13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 KIF2BQ8N4N8 673 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 ANAPC5Q9UJX4 755 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 GTPBP10A4D1E9 387 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 TCP11X1B4DZS4 312 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 TRAPPC3O43617 180 aa13.56□□□□□ -0.24
PPP4R1-202ENST00000400555 SPAG7O75391 227 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms