RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 RCSD1Q6JBY9 416 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 PATL1Q86TB9 770 aaKnown RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 ACAP3Q96P50 834 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 SERPINB12Q96P63 405 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 AGPAT1Q99943 283 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 CAMSAP1Q5T5Y3 1602 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 RHOBTB3O94955 611 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 CDC27P30260 824 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 S100A5P33763 92 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 PEX3P56589 373 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 KIAA0825Q8IV33 1275 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 GPBP1L1Q9HC44 474 aaPredicted RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 GOLGA8IPA6NC78 632 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 ATP6V1E1P36543 226 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 KCNQ4P56696 695 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 NAB2Q15742 525 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 METTL16Q86W50 562 aaKnown RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 COL23A1Q86Y22 540 aaPredicted RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 OTUB1Q96FW1 271 aaPredicted RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 FRMD8P1Q9BZ68 369 aaPredicted RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 PIH1D3Q9NQM4 214 aaKnown RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 ZNF18P17022 549 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 TYK2P29597 1187 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 CENPCQ03188 943 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 IMPG1Q17R60 797 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 TRAPPC11Q7Z392 1133 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 TSPAN17Q96FV3 270 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 FBXO2Q9UK22 296 aaPredicted RBP10.13□□□□□ -0.79
SNX1-202ENST00000380285 PCDHA6Q9UN73 950 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 PCDHA8Q9Y5H6 950 aa10.13□□□□□ -0.79
SNX1-202ENST00000380285 CCDC78A2IDD5 438 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 RSPH10B2B2RC85 870 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 RSPH10BP0C881 870 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 BCAR1P56945 870 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 STILQ15468 1287 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 LRRC7Q96NW7 1537 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 NEDD4P46934 1319 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 CCDC159P0C7I6 412 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 SCNN1DP51172 638 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 ARSEP51690 589 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 EXOSC10Q01780 885 aaKnown RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 TXNRD1Q16881 649 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 P3H1Q32P28 736 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 SUPT20HL1Q3ZLR7 823 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 LONP2Q86WA8 852 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 C7orf31Q8N865 590 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 SNX19Q92543 992 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 THOC1Q96FV9 657 aaKnown RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 PAGR1Q9BTK6 254 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 COA1Q9GZY4 146 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 COG4Q9H9E3 785 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 AMACRQ9UHK6 382 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 CDY1Q9Y6F8 540 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 LMTK3Q96Q04 1460 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 MAGEA13PA6NCF6 341 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 DPYDQ12882 1025 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 MAPK6Q16659 721 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 TMEM270Q6UE05 265 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 SEPT8Q92599 483 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 FEM1BQ9UK73 627 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 ESYT3A0FGR9 886 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 O00370 1275 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 APOL1O14791 398 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 H2AFYO75367 372 aaKnown RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 MYO1DO94832 1006 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 MRPL28Q13084 256 aaKnown RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 DACH2Q96NX9 599 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 TBC1D4O60343 1298 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 ANP32DO95626 131 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 GRIN1Q05586 938 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 PIGHQ14442 188 aaPredicted RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 LRRC31Q6UY01 552 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 ABI1Q8IZP0 508 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 TCP10L2B9ZVM9 353 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 P4HA2O15460 535 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 PHKA2P46019 1235 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 MRPS15P82914 257 aaKnown RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 CAPRIN1Q14444 709 aaKnown RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 PTGISQ16647 500 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 TBC1D10CQ8IV04 446 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 KIAA2013Q8IYS2 634 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 GID8Q9NWU2 228 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 ZNF229Q9UJW7 825 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 MADDQ8WXG6 1647 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 LRRIQ3A6PVS8 624 aaPredicted RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 ANGPT2O15123 496 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 KITP10721 976 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 MTERF2Q49AM1 385 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 ADSSL1Q8N142 457 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
SNX1-202ENST00000380285 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
SNX1-202ENST00000380285 GTPBP10A4D1E9 387 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 ANKRD65E5RJM6 399 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 NCK2O43639 380 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms