RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 FMR1Q06787 632 aaKnown RBP eCLIP20.94■□□□□ 0.94
PCDH8-202ENST00000377942 CATSPER3Q86XQ3 398 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 CCDC197Q8NCU1 140 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 ATP6V1E2Q96A05 226 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 MTIF3Q9H2K0 278 aaKnown RBP20.94■□□□□ 0.94
PCDH8-202ENST00000377942 POLIQ9UNA4 740 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 APOEP02649 317 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 CYP2C9P11712 490 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 PMLP29590 882 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 IFNAR2P48551 515 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 NCOA4Q13772 614 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 FBXL16Q8N461 479 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 HEMGNQ9BXL5 484 aa20.94■□□□□ 0.94
PCDH8-202ENST00000377942 MYBP10242 640 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 EPHX2P34913 555 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 ACOT2P49753 483 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 SLC7A5Q01650 507 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 RNF219Q5W0B1 726 aaPredicted RBP20.93■□□□□ 0.94
PCDH8-202ENST00000377942 PLA2G4FQ68DD2 849 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 DEPDC1BQ8WUY9 529 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 TTC25Q96NG3 672 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 UVRAGQ9P2Y5 699 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.93■□□□□ 0.94
PCDH8-202ENST00000377942 ARHGAP42A6NI28 874 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 H3BRJ5 948 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 CYP26A1O43174 497 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 EVI5O60447 810 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 UBN1Q9NPG3 1134 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 NFU1Q9UMS0 254 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 FAM187AA6NFU0 413 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 CASP8Q14790 479 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 ATF7IP2Q5U623 682 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 RNF25Q96BH1 459 aaPredicted RBP20.93■□□□□ 0.94
PCDH8-202ENST00000377942 CFAP36Q96G28 342 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 SH2D3AQ9BRG2 576 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 RIOX1Q9H6W3 641 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 DDTLA6NHG4 134 aaPredicted RBP20.93■□□□□ 0.94
PCDH8-202ENST00000377942 HMGB1P1B2RPK0 211 aaPredicted RBP20.93■□□□□ 0.94
PCDH8-202ENST00000377942 TTI1O43156 1089 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 CPB1P15086 417 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 BCAR1P56945 870 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 SLC18A3Q16572 532 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 SNX24Q9Y343 169 aa20.93■□□□□ 0.94
PCDH8-202ENST00000377942 CDK17Q00537 523 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 MAPK8IP2Q13387 824 aaPredicted RBP20.92■□□□□ 0.94
PCDH8-202ENST00000377942 CDKL3Q8IVW4 592 aaPredicted RBP20.92■□□□□ 0.94
PCDH8-202ENST00000377942 PCSK1NQ9UHG2 260 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 UBE2Q2LH0YL09 131 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 RALAP11233 206 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 STX1BP61266 288 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 BTBD8Q5XKL5 378 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 EFCAB12Q6NXP0 572 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 APPL2Q8NEU8 664 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 C18orf8Q96DM3 657 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 TMEM106CQ9BVX2 250 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 SCAF8Q9UPN6 1271 aaKnown RBP20.92■□□□□ 0.94
PCDH8-202ENST00000377942 HEY1Q9Y5J3 304 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 UCHL3P15374 230 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 FCGRTP55899 365 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 ACTR2P61160 394 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 NNTQ13423 1086 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 LMCD1Q9NZU5 365 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 RPS6KA5O75582 802 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 RGS2P41220 211 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 FKBP1CQ5VVH2 108 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 LMBRD2Q68DH5 695 aaPredicted RBP20.92■□□□□ 0.94
PCDH8-202ENST00000377942 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 TMEM8AQ9HCN3 771 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 ABCB6Q9NP58 842 aa20.92■□□□□ 0.94
PCDH8-202ENST00000377942 EXTL3O43909 919 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 ITPRIPL1Q6GPH6 555 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 PHLDB3Q6NSJ2 640 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 MAGEB5Q9BZ81 275 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 SAYSD1Q9NPB0 183 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 CSPG5O95196 566 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 NR1I3Q14994 352 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 KLC3Q6P597 504 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 SRRM1Q8IYB3 904 aaKnown RBP20.91■□□□□ 0.94
PCDH8-202ENST00000377942 SLC4A1P02730 911 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 KRT3P12035 628 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 CLCN6P51797 869 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 GTF2A1P52655 376 aaPredicted RBP20.91■□□□□ 0.94
PCDH8-202ENST00000377942 NR1H3Q13133 447 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 SH2D4BQ5SQS7 431 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 MCUQ8NE86 351 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 IDI2Q9BXS1 227 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 AGXT2Q9BYV1 514 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 AFG1LQ8WV93 481 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.91■□□□□ 0.94
PCDH8-202ENST00000377942 SNX9Q9Y5X1 595 aa20.91■□□□□ 0.94
PCDH8-202ENST00000377942 DPYSL4O14531 572 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 PAPOLAP51003 745 aaKnown RBP20.9■□□□□ 0.94
PCDH8-202ENST00000377942 KIAA1755Q5JYT7 1200 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 HEATR6Q6AI08 1181 aaKnown RBP20.9■□□□□ 0.94
PCDH8-202ENST00000377942 ADGRA1Q86SQ6 560 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 KRT38O76015 456 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 PTPAQ15257 358 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 RBBP5Q15291 538 aaKnown RBP20.9■□□□□ 0.94
PCDH8-202ENST00000377942 C15orf52Q6ZUT6 534 aaKnown RBP20.9■□□□□ 0.94
PCDH8-202ENST00000377942 DPF2Q92785 391 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms