RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TAOK3Q9H2K8 898 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 ATP8B3O60423 1300 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 ALAS1P13196 640 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 MAGEA10P43363 369 aaPredicted RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 KCNJ1P48048 391 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 RPS8P62241 208 aaKnown RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 IL9RQ01113 521 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 KPNB1Q14974 876 aaKnown RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 DBN1Q16643 649 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 WDR72Q3MJ13 1102 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 KIAA0825Q8IV33 1275 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 ARHGEF26Q96DR7 871 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 POP1Q99575 1024 aaKnown RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 DNAJC17Q9NVM6 304 aaKnown RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 COL22A1Q8NFW1 1626 aaPredicted RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 GFPT2O94808 682 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 FAM200BP0CF97 657 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 CTNNA2P26232 953 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 CCNFP41002 786 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 RTP1P59025 263 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 AP1B1Q10567 949 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 GLYCTKQ8IVS8 523 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 CCDC105Q8IYK2 499 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 SUDS3Q9H7L9 328 aaPredicted RBP21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 ROBO1Q9Y6N7 1651 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 CHKAP35790 457 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 CDR2Q01850 454 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 HAPLN3Q96S86 360 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 KRT82Q9NSB4 513 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 ZNF510Q9Y2H8 683 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 NCANO14594 1321 aa21.99■■□□□ 1.11
TMEFF1-201ENST00000374879 MARCKSL1P49006 195 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 NEK3P51956 506 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 KYNUQ16719 465 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 PPFIBP2Q8ND30 876 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 OLIG1Q8TAK6 271 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 KRT35Q92764 455 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 TUBGCP5Q96RT8 1024 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 TCRBV7S2A1N4TA0A589 114 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 ANXA13P27216 316 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 TMEM62Q0P6H9 643 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 ZRSR2Q15696 482 aaKnown RBP21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 ECM1Q16610 540 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 PPP1R21Q6ZMI0 780 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 KRT25Q7Z3Z0 450 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 KSR1Q8IVT5 923 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 SLC30A5Q8TAD4 765 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 MIPOL1Q8TD10 442 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 TBCKQ8TEA7 893 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 SNX29Q8TEQ0 813 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 C7orf43Q8WVR3 580 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 KCTD10Q9H3F6 313 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 RHBDL2Q9NX52 303 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 MCM9Q9NXL9 1143 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 MAD2L2Q9UI95 211 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 NAALADL1Q9UQQ1 740 aa21.98■■□□□ 1.11
TMEFF1-201ENST00000374879 MAP3K7O43318 606 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 PSMG1O95456 288 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 JAM2P57087 298 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 BPIFB4P59827 614 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 CACNB1Q02641 598 aaPredicted RBP21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 HS2ST1Q7LGA3 356 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 CTNNBL1Q8WYA6 563 aaPredicted RBP21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 ZNF184Q99676 751 aaPredicted RBP21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 ETNK2Q9NVF9 386 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 COG5Q9UP83 839 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 NUMBLQ9Y6R0 609 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 TP73O15350 636 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 TMEM253P0C7T8 217 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 CALCOCO2Q13137 446 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 LIN52Q52LA3 116 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 SBK1Q52WX2 424 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 SLC10A5Q5PT55 438 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 CYFIP1Q7L576 1253 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 EPM2AIP1Q7L775 607 aaPredicted RBP21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 CCDC24Q8N4L8 307 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 PNMA1Q8ND90 353 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 CFAP61Q8NHU2 1237 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 SCFD1Q8WVM8 642 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 C10orf82Q8WW14 230 aa21.97■■□□□ 1.11
TMEFF1-201ENST00000374879 HNRNPRO43390 633 aaKnown RBP21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 USP17L8P0C7I0 530 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 ABCD1P33897 745 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 MTMR9Q96QG7 549 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 SIX2Q9NPC8 291 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 LNPEPQ9UIQ6 1025 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 ZFP69BQ9UJL9 534 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 ADGRA3Q8IWK6 1321 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 MAGEB2O15479 319 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 COILP38432 576 aaPredicted RBP21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 CLUL1Q15846 466 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 CALCRLQ16602 461 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 GSTA3Q16772 222 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 TMEM63BQ5T3F8 832 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 NR1H4Q96RI1 486 aaPredicted RBP21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 METTL14Q9HCE5 456 aaKnown RBP21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 ALG6Q9Y672 507 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 COMMD3-BMI1R4GMX3 469 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 SYNGAP1Q96PV0 1343 aa21.96■■□□□ 1.11
TMEFF1-201ENST00000374879 COL5A3P25940 1745 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms