RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LRP6O75581 1613 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 LMTK2Q8IWU2 1503 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 DAPK1P53355 1430 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 JCADQ9P266 1359 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 CCDC154A6NI56 674 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 LRRC10BA6NIK2 292 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 H0Y858 1186 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 HTRA2O43464 458 aaPredicted RBP7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 MYBP10242 640 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 COL6A1P12109 1028 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 EDNRBP24530 442 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 MCAMP43121 646 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 RHBDL3P58872 404 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 MGAT5Q09328 741 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 GALEQ14376 348 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 PPP4R4Q6NUP7 873 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 LMBR1LQ6UX01 489 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 PRR18Q8N4B5 295 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 MVB12AQ96EY5 273 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 ADI1Q9BV57 179 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 GREM2Q9H772 168 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 SAE1Q9UBE0 346 aaPredicted RBP7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 DNAI1Q9UI46 699 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 IPPQ9Y573 584 aa7.12□□□□□ -1.27
RNU4-39P-201ENST00000362455 EFCAB6Q5THR3 1501 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 XIRP1Q702N8 1843 aaKnown RBP7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 A0A0G2JNJ9 132 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 DTNBO60941 627 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 CYP7B1O75881 506 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 CHGBP05060 677 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 WASP42768 502 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 MLLT6P55198 1093 aaPredicted RBP7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 PURAQ00577 322 aaKnown RBP7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 ZBTB34Q8NCN2 500 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 PPP1R14CQ8TAE6 165 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 ACO2Q99798 780 aaKnown RBP7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 CHMP4AQ9BY43 222 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 CHST12Q9NRB3 414 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 Q9UFV3 132 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 FBXO10Q9UK96 956 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 CDC42EP3Q9UKI2 254 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 INTUQ9ULD6 942 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 PIK3C2BO00750 1634 aa7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 EIF2AK4Q9P2K8 1649 aaKnown RBP7.11□□□□□ -1.27
RNU4-39P-201ENST00000362455 ADAMTS13Q76LX8 1427 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 MSH6P52701 1360 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 KANK1Q14678 1352 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 PLEKHG1Q9ULL1 1385 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 PLA2G1BP04054 148 aaKnown RBP7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 TRIM27P14373 513 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 GSPT1P15170 499 aaKnown RBP7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 DLG4P78352 724 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 PPP3CAQ08209 521 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 PGS1Q32NB8 556 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 C3orf36Q3SXR2 165 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 SYCP2LQ5T4T6 812 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 TRMT10BQ6PF06 316 aaKnown RBP7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 FBXO15Q8NCQ5 510 aaPredicted RBP7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 ZCCHC14Q8WYQ9 949 aaKnown RBP7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 DPF2Q92785 391 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 SARGQ9BW04 601 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 PMF1-BGLAPU3KQ54 211 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 NKTRP30414 1462 aaKnown RBP7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 FGD6Q6ZV73 1430 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 PTPRUQ92729 1446 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 RIMS2Q9UQ26 1411 aa7.1□□□□□ -1.27
RNU4-39P-201ENST00000362455 ANKRD30AQ9BXX3 1397 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 A6NNZ2 444 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 TMEM127O75204 238 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 STAT5BP51692 787 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 CD69Q07108 199 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 HDAC1Q13547 482 aaPredicted RBP7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 MCTP1Q6DN14 999 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 KLHDC10Q6PID8 442 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 BRINP3Q76B58 766 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 TMEFF1Q8IYR6 380 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 MARCH10Q8NA82 808 aaPredicted RBP7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 OR2I1PQ8NGU4 316 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 PPP1R35Q8TAP8 253 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 RIN2Q8WYP3 895 aaPredicted RBP7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 PMM1Q92871 262 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 NKD2Q969F2 451 aaPredicted RBP7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 C1GALT1C1Q96EU7 318 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 PAWRQ96IZ0 340 aaKnown RBP7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 WDR92Q96MX6 357 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 FAM193BQ96PV7 902 aaPredicted RBP7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 OSBPL6Q9BZF3 934 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 MAN1C1Q9NR34 630 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 RBM12Q9NTZ6 932 aaKnown RBP7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 CEP152O94986 1710 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 ROBO1Q9Y6N7 1651 aa7.09□□□□□ -1.27
RNU4-39P-201ENST00000362455 NWD1Q149M9 1564 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 SPATA31A6Q5VVP1 1343 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 A0A1W2PR48 441 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 LY86O95711 162 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 HNRNPLP14866 589 aaKnown RBP eCLIP7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 KCNQ1P51787 676 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 MGAT2Q10469 447 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 IL10RAQ13651 578 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 EIF4HQ15056 248 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms