RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ANKRD18BA2A2Z9 1011 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 CCNT1O60563 726 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 PGFP49763 221 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 SP3Q02447 781 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 EFTUD2Q15029 972 aaKnown RBP eCLIP6.17□□□□□ -1.42
CD47-201ENST00000355354 WDR72Q3MJ13 1102 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 MAMDC4Q6UXC1 1216 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 SLC35C1Q96A29 364 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 AGBL1Q96MI9 1066 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 LLPHQ9BRT6 129 aaKnown RBP6.17□□□□□ -1.42
CD47-201ENST00000355354 ABCA12Q86UK0 2595 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 MEIS3P2A8K0S8 358 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 STX10O60499 249 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 PPP6R2O75170 966 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 CD48P09326 243 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 ACTN2P35609 894 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 GRM5P41594 1212 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 IFNAR2P48551 515 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 GK3PQ14409 553 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 CAPN12Q6ZSI9 719 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 ADGRF4Q8IZF3 695 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 CTAGE1Q96RT6 745 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 THAP2Q9H0W7 228 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 KCND1Q9NSA2 647 aa6.17□□□□□ -1.42
CD47-201ENST00000355354 COL4A3Q01955 1670 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 MYO16Q9Y6X6 1858 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 MTORP42345 2549 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 SCN3AQ9NY46 2000 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 ARHGAP6O43182 974 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 CLK2P49760 499 aaKnown RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 COL19A1Q14993 1142 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 TAF7LQ5H9L4 462 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 RFX8Q6ZV50 586 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 IGDCC3Q8IVU1 814 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 SLC43A3Q8NBI5 491 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 TATDN2Q93075 761 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 EPB41L5Q9HCM4 733 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 AGTPBP1Q9UPW5 1226 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 IGLV3-22A0A075B6J6 115 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 DDX39AO00148 427 aaKnown RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 CST3P01034 146 aaPredicted RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 HPDP32754 393 aaPredicted RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 GRIA1P42261 906 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 GUCY2DQ02846 1103 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 ITGB3BPQ13352 177 aaPredicted RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 IHHQ14623 411 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 IFIT1BQ5T764 474 aaKnown RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 TRIM50Q86XT4 487 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 EPS8L3Q8TE67 593 aaKnown RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.16□□□□□ -1.42
CD47-201ENST00000355354 RUFY2Q8WXA3 655 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 JAKMIP2Q96AA8 810 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 GANQ9H2C0 597 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 BHMT2Q9H2M3 363 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 DPH5Q9H2P9 285 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 PNMA2Q9UL42 364 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 PKD1L1Q8TDX9 2849 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 DNAJC25-GNG10A0A024R161 153 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 C6orf229H3BNL8 230 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 NRDCO43847 1150 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 ATP4AP20648 1035 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 USP14P54578 494 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 CCDC122Q5T0U0 273 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 SCYL3Q8IZE3 742 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 KCNG4Q8TDN1 519 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 SLC5A5Q92911 643 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 TMEM237Q96Q45 408 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 DNAJC7Q99615 494 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 NOL10Q9BSC4 688 aaKnown RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 RBPJLQ9UBG7 517 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 CYTH4Q9UIA0 394 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 MFHAS1Q9Y4C4 1052 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 RPTORQ8N122 1335 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 TSPY2A6NKD2 308 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 T-ENOLP0DO92 83 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 PYGMP11217 842 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 HIBADHP31937 336 aaKnown RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 TTF1Q15361 905 aaPredicted RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 MFSD14BQ5SR56 506 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 CASC1Q6TDU7 716 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 TAS1R3Q7RTX0 852 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 RETREG2Q8NC44 543 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 STKLD1Q8NE28 680 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 IFT81Q8WYA0 676 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 ASCC2Q9H1I8 757 aaPredicted RBP6.16□□□□□ -1.42
CD47-201ENST00000355354 ANLNQ9NQW6 1124 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 NENFQ9UMX5 172 aa6.16□□□□□ -1.42
CD47-201ENST00000355354 TRIM75PA6NK02 468 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 F5H423 210 aaPredicted RBP6.15□□□□□ -1.42
CD47-201ENST00000355354 FAM155BO75949 473 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 CLTAP09496 248 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 ITGA7Q13683 1181 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 PTPRRQ15256 657 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 SYNE3Q6ZMZ3 975 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 SLC47A2Q86VL8 602 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 TBC1D22AQ8WUA7 517 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 TRIB2Q92519 343 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 DDX50Q9BQ39 737 aaKnown RBP6.15□□□□□ -1.42
CD47-201ENST00000355354 EMILIN3Q9NT22 766 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 KIAA1024Q9UPX6 916 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms