RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 ATL2Q8NHH9 583 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 CEP19Q96LK0 163 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 GCNAQ96QF7 691 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 SENP1Q9P0U3 644 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 PCDHA10Q9Y5I2 948 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 PDHA1P08559 390 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 MYL3P08590 195 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 SRGNP10124 158 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 ARSEP51690 589 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 EFHC2Q5JST6 749 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 ITPRIPL1Q6GPH6 555 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 HPS3Q969F9 1004 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 KCNF1Q9H3M0 494 aa17.8■□□□□ 0.44
CNTNAP3-201ENST00000297668 H3BRJ5 948 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 RTN2O75298 545 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 CSPG5O95196 566 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 RXRBP28702 533 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 AP3M2P53677 418 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 TAP1Q03518 808 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 ZNF772Q68DY9 489 aaPredicted RBP17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 PDCD6IPQ8WUM4 868 aaKnown RBP17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 CYP26A1O43174 497 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 MCF2P10911 925 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 FOXD4Q12950 439 aaPredicted RBP17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 KIAA1755Q5JYT7 1200 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 CEP70Q8NHQ1 597 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 ACAP3Q96P50 834 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 KIFC3Q9BVG8 833 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 TMEM247A6NEH6 219 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 FAM205CA6NFA0 338 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 CCDC22O60826 627 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 RASGRP2Q7LDG7 609 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 ULK4Q96C45 1275 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 PHF20Q9BVI0 1012 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 NDE1Q9NXR1 346 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 ADA2Q9NZK5 511 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 FDX1P10109 184 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 ADRA2BP18089 450 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 FGFR4P22455 802 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 HSPA9P38646 679 aaKnown RBP17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 TUFT1Q9NNX1 390 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 RGL1Q9NZL6 768 aa17.79■□□□□ 0.44
CNTNAP3-201ENST00000297668 F5H423 210 aaPredicted RBP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 ZNF185O15231 689 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 RECQLP46063 649 aaPredicted RBP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 FXR1P51114 621 aaKnown RBP eCLIP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 AP1B1Q10567 949 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 PARP9Q8IXQ6 854 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 ZNF668Q96K58 619 aaPredicted RBP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 CYP4F11Q9HBI6 524 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 ITIH6Q6UXX5 1313 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 USP42Q9H9J4 1324 aaKnown RBP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 SLC1A1P43005 524 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 HIF1AQ16665 826 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 ANO5Q75V66 913 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 CYFIP1Q7L576 1253 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 YY1AP1Q9H869 796 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 VIPAS39Q9H9C1 493 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 SLC16A3O15427 465 aaKnown RBP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 IFNA8P32881 189 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 DPYDQ12882 1025 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 EFTUD2Q15029 972 aaKnown RBP eCLIP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 SNX19Q92543 992 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 MED14O60244 1454 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 A8MXQ7 604 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 IGDCC4Q8TDY8 1250 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 NSUN4Q96CB9 384 aaKnown RBP17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 RMDN2Q96LZ7 410 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 ACAD9Q9H845 621 aa17.78■□□□□ 0.44
CNTNAP3-201ENST00000297668 ZFXP17010 805 aaPredicted RBP17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 ACTR2P61160 394 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 CAPRIN1Q14444 709 aaKnown RBP17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 HACD3Q9P035 362 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 PIM2Q9P1W9 311 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 TUBE1Q9UJT0 475 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 HPCAL4Q9UM19 191 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 PRAMEP78395 509 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 LDHDQ86WU2 507 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 C7orf25Q9BPX7 421 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 FAM167BQ9BTA0 163 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 STK33Q9BYT3 514 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 HERC5Q9UII4 1024 aaKnown RBP17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 ANP32DO95626 131 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 AGTP01019 485 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 RAD23BP54727 409 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 GALCP54803 685 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 C1orf228Q6PIY5 440 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 OR6P1Q8NGX9 317 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 WWP1Q9H0M0 922 aa17.77■□□□□ 0.44
CNTNAP3-201ENST00000297668 SHROOM2Q13796 1616 aa17.77■□□□□ 0.43
CNTNAP3-201ENST00000297668 FOXP2O15409 715 aa17.77■□□□□ 0.43
CNTNAP3-201ENST00000297668 MDH1P40925 334 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms