RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MIGA2Q7L4E1 593 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 GPR135Q8IZ08 494 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 CMTM4Q8IZR5 234 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 CYFIP2Q96F07 1278 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 DMRTA2Q96SC8 542 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 C7orf25Q9BPX7 421 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 AGO3Q9H9G7 860 aaKnown RBP5.79□□□□□ -1.48
CCDC54-201ENST00000261058 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.79□□□□□ -1.48
CCDC54-201ENST00000261058 PUF60Q9UHX1 559 aaKnown RBP5.79□□□□□ -1.48
CCDC54-201ENST00000261058 OAZ3Q9UMX2 235 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 PCDHB1Q9Y5F3 818 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 ATRNL1Q5VV63 1379 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 AP1G1O43747 822 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 ATF3P18847 181 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 ADSLP30566 484 aaPredicted RBP5.78□□□□□ -1.48
CCDC54-201ENST00000261058 TBX4P57082 545 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 ATP8B2P98198 1209 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 CDC42EP1Q00587 391 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 IL10RAQ13651 578 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 PGS1Q32NB8 556 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 ZFYVE27Q5T4F4 411 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 ARHGEF18Q6ZSZ5 1173 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 FRMD5Q7Z6J6 570 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 TRMT2AQ8IZ69 625 aaKnown RBP5.78□□□□□ -1.48
CCDC54-201ENST00000261058 C1GALT1C1Q96EU7 318 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 MRGPRX4Q96LA9 322 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 PDCD2LQ9BRP1 358 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 IL23AQ9NPF7 189 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 OBP2AQ9NY56 170 aa5.78□□□□□ -1.48
CCDC54-201ENST00000261058 VSTM5A8MXK1 200 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 H3BML4 177 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 WNT10BO00744 389 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 ADCY6O43306 1168 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 LAMTOR5O43504 91 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 AMY1AP04745 511 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 CR2P20023 1033 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 GNALP38405 381 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 DUSP2Q05923 314 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 TARDBPQ13148 414 aaKnown RBP eCLIP5.77□□□□□ -1.49
CCDC54-201ENST00000261058 RIN1Q13671 783 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 HLTFQ14527 1009 aaKnown RBP eCLIP5.77□□□□□ -1.49
CCDC54-201ENST00000261058 FBLN7Q53RD9 439 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 SLFN13Q68D06 897 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 ZNF572Q7Z3I7 529 aaPredicted RBP5.77□□□□□ -1.49
CCDC54-201ENST00000261058 DGKHQ86XP1 1220 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 FEZF2Q8TBJ5 459 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 CASKIN2Q8WXE0 1202 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 BORCS6Q96GS4 357 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 RPL10LQ96L21 214 aaKnown RBP5.77□□□□□ -1.49
CCDC54-201ENST00000261058 MAP3K14Q99558 947 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 MANSC1Q9H8J5 431 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 USP40Q9NVE5 1235 aa5.77□□□□□ -1.49
CCDC54-201ENST00000261058 SASH1O94885 1247 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 PPP4R3AQ6IN85 833 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 SPOCD1Q6ZMY3 1216 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 SHCBP1Q8NEM2 672 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 KAT5Q92993 513 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 LRGUKQ96M69 825 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 SAMD11Q96NU1 681 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 ACO2Q99798 780 aaKnown RBP5.76□□□□□ -1.49
CCDC54-201ENST00000261058 DPYSL5Q9BPU6 564 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 SSBP3Q9BWW4 388 aaPredicted RBP5.76□□□□□ -1.49
CCDC54-201ENST00000261058 NELFAQ9H3P2 528 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 PRDM11Q9NQV5 511 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 C1orf112Q9NSG2 853 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 PPP4R1LQ9P1A2 415 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 PCDHA13Q9Y5I0 950 aa5.76□□□□□ -1.49
CCDC54-201ENST00000261058 OTOL1A6NHN0 477 aaPredicted RBP5.75□□□□□ -1.49
CCDC54-201ENST00000261058 SLC16A6O15403 523 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 EIF5BO60841 1220 aaKnown RBP5.75□□□□□ -1.49
CCDC54-201ENST00000261058 ALOX15P16050 662 aaPredicted RBP5.75□□□□□ -1.49
CCDC54-201ENST00000261058 BMP7P18075 431 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 CASRP41180 1078 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 IL12RB1P42701 662 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 MRPL49Q13405 166 aaKnown RBP5.75□□□□□ -1.49
CCDC54-201ENST00000261058 MTM1Q13496 603 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 GALEQ14376 348 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 PRAMEF14Q5SWL7 426 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 KRT40Q6A162 431 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 CHST15Q7LFX5 561 aaPredicted RBP5.75□□□□□ -1.49
CCDC54-201ENST00000261058 TTC7BQ86TV6 843 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 RHOT1Q8IXI2 618 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 PQLC1Q8N2U9 271 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 ZGPATQ8N5A5 531 aaKnown RBP5.75□□□□□ -1.49
CCDC54-201ENST00000261058 IFI44Q8TCB0 444 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 FAM193BQ96PV7 902 aaPredicted RBP5.75□□□□□ -1.49
CCDC54-201ENST00000261058 LMF1Q96S06 567 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 PCGF6Q9BYE7 350 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 KCNH6Q9H252 994 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 LANCL2Q9NS86 450 aa5.75□□□□□ -1.49
CCDC54-201ENST00000261058 UBE2QL1A1L167 161 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 PRC1O43663 620 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 PLATP00750 562 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 ALDH2P05091 517 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 RPLP2P05387 115 aaKnown RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 PCSK1P29120 753 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 CNR2P34972 360 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 FLT3LGP49771 235 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 GZMKP49863 264 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms