RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Zcchc18Q8VD24 393 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Rnf34Q99KR6 376 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 H2-OaQ9QWV1 250 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gm11983V9GXS8 105 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Slc4a9E9PUP3 929 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Trdmt1O55055 415 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 AfmO89020 608 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tbx3P70324 741 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Slc45a1Q8BIV7 751 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 N4bp3Q8C7U1 537 aa17.1■□□□□ 0.33
Trim39-203ENSMUST00000113706 Vmn2r15L7N2A0 855 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Cul4aQ3TCH7 759 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Rnpc3Q3UZ01 514 aaKnown RBP17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Spag7Q7TNE3 227 aaKnown RBP17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Nucks1Q80XU3 234 aaKnown RBP17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Lrsam1Q80ZI6 727 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Olfr395Q8VGR3 312 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Psmd6Q99JI4 389 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Pkp2Q9CQ73 795 aaKnown RBP17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ighmbp2P40694 993 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 CiitaP79621 1155 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Fam189a2Q4FZH1 290 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Arhgap1Q5FWK3 439 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Asap3Q5U464 904 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mtmr10Q7TPM9 771 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mbtps2Q8CHX6 515 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Xpo5Q924C1 1204 aaKnown RBP17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Znf687Q9D2D7 1237 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Rnf139Q7TMV1 668 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Ppme1Q8BVQ5 386 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Usp38Q8BW70 1042 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Rint1Q8BZ36 792 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Chn1Q91V57 459 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Sh2b1Q91ZM2 756 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 CalcbQ99MP3 130 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Cep72Q9D3R3 646 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Nudt12Q9DCN1 462 aa17.09■□□□□ 0.33
Trim39-203ENSMUST00000113706 Cpsf2O35218 782 aaKnown RBP17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Skap1Q3UUV5 355 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 KaznQ69ZS8 779 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tcp10aQ80W76 438 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Trim32Q8CH72 655 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gdap1l1Q8VE33 370 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tmem206Q9D771 350 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Cst12Q9DAN8 128 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tcirg1Q9JHF5 834 aa17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Celf2Q9Z0H4 508 aaKnown RBP17.08■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mia3Q8BI84 1930 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Nup210lQ9D2F7 1881 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Atp2c2A7L9Z8 944 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Hsd17b1P51656 344 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Morf4l1P60762 362 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cdc14aQ6GQT0 603 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Elmo3Q8BYZ7 720 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ttc16Q8C1F5 767 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Atp6v0a4Q920R6 833 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Asb11Q9CQ31 323 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Stx17Q9D0I4 301 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Q9D2Q3 444 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Rilpl1Q9JJC6 406 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cdk14O35495 469 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 TyrobpO54885 114 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Rps6ka1P18653 724 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Myo1fP70248 1099 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Rnf40Q3U319 1001 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Znf579Q80VM4 562 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Bmp3Q8BHE5 468 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 MyocdQ8VIM5 935 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Stk4Q9JI11 487 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Fut2Q9JL27 347 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 CenphQ9QYM8 241 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ankrd2Q9WV06 328 aa17.08■□□□□ 0.32
Trim39-203ENSMUST00000113706 Zfp266E9Q2S7 604 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Mroh9G5E8L9 891 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Lmnb2P21619 596 aaKnown RBP17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Spryd7Q3TFQ1 196 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Srebf2Q3U1N2 1130 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 FancbQ5XJY6 703 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Znf507Q6ZPY5 941 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Dzip3Q7TPV2 1204 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ivns1abpQ920Q8 642 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Smco2Q9DA21 347 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Adam22Q9R1V6 904 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Olfr552E9Q545 317 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 DmpkP54265 631 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 GclcP97494 637 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Kdm7aQ3UWM4 940 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Zfp943Q6NZP4 507 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ints2Q80UK8 1198 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Map1sQ8C052 973 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 TxlnbQ8VBT1 685 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ctnnbl1Q9CWL8 563 aaKnown RBP17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 IvdQ9JHI5 424 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Pds5aQ6A026 1332 aa17.07■□□□□ 0.32
Trim39-203ENSMUST00000113706 Tmigd3G3X8R9 209 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Skap2Q3UND0 358 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 LbpQ61805 481 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 AdigQ8R400 80 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Rexo2Q9D8S4 237 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Spock2Q9ER58 423 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms