Protein–RNA interactions for Protein: Q3U1N2

Srebf2, Sterol regulatory element-binding protein 2, mousemouse

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf2Q3U1N2 Gm25239-201ENSMUST00000174915 86 ntBASIC43.18■■■■■ 4.5
Srebf2Q3U1N2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
Srebf2Q3U1N2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
Srebf2Q3U1N2 Gm24109-201ENSMUST00000175489 103 ntBASIC37.56■■■■□ 3.6
Srebf2Q3U1N2 Gm15042-201ENSMUST00000120212 883 ntBASIC37.43■■■■□ 3.58
Srebf2Q3U1N2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Srebf2Q3U1N2 Gm15045-201ENSMUST00000117359 883 ntBASIC36.5■■■■□ 3.43
Srebf2Q3U1N2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
Srebf2Q3U1N2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
Srebf2Q3U1N2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Srebf2Q3U1N2 Gm23366-201ENSMUST00000175022 89 ntBASIC36.08■■■■□ 3.37
Srebf2Q3U1N2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Srebf2Q3U1N2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Srebf2Q3U1N2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
Srebf2Q3U1N2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.15■■■■□ 3.22
Srebf2Q3U1N2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Srebf2Q3U1N2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.85■■■■□ 3.17
Srebf2Q3U1N2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.79■■■■□ 3.16
Srebf2Q3U1N2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Srebf2Q3U1N2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
Srebf2Q3U1N2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Srebf2Q3U1N2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Srebf2Q3U1N2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Srebf2Q3U1N2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.29■■■■□ 3.08
Srebf2Q3U1N2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Srebf2Q3U1N2 Gm25238-201ENSMUST00000174914 89 ntBASIC34.17■■■■□ 3.06
Srebf2Q3U1N2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
Srebf2Q3U1N2 Psd-208ENSMUST00000224556 2034 ntBASIC33.95■■■■□ 3.03
Srebf2Q3U1N2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.84■■■■□ 3.01
Srebf2Q3U1N2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Srebf2Q3U1N2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Srebf2Q3U1N2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.59■■■□□ 2.97
Srebf2Q3U1N2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Srebf2Q3U1N2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Srebf2Q3U1N2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.4■■■□□ 2.94
Srebf2Q3U1N2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Srebf2Q3U1N2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Srebf2Q3U1N2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
Srebf2Q3U1N2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.18■■■□□ 2.9
Srebf2Q3U1N2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.17■■■□□ 2.9
Srebf2Q3U1N2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.16■■■□□ 2.9
Srebf2Q3U1N2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Srebf2Q3U1N2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Srebf2Q3U1N2 Gm25262-201ENSMUST00000174934 133 ntBASIC32.98■■■□□ 2.87
Srebf2Q3U1N2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.82■■■□□ 2.84
Srebf2Q3U1N2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Srebf2Q3U1N2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Srebf2Q3U1N2 Gm27325-201ENSMUST00000175467 74 ntBASIC32.75■■■□□ 2.83
Srebf2Q3U1N2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Srebf2Q3U1N2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.55■■■□□ 2.8
Srebf2Q3U1N2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.54■■■□□ 2.8
Srebf2Q3U1N2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Srebf2Q3U1N2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Srebf2Q3U1N2 Rab21-202ENSMUST00000218831 843 ntBASIC32.4■■■□□ 2.78
Srebf2Q3U1N2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.39■■■□□ 2.78
Srebf2Q3U1N2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Srebf2Q3U1N2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.35■■■□□ 2.77
Srebf2Q3U1N2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.33■■■□□ 2.77
Srebf2Q3U1N2 Gm26115-201ENSMUST00000175605 87 ntBASIC32.3■■■□□ 2.76
Srebf2Q3U1N2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
Srebf2Q3U1N2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Srebf2Q3U1N2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Srebf2Q3U1N2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Srebf2Q3U1N2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Srebf2Q3U1N2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Srebf2Q3U1N2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Srebf2Q3U1N2 Gm8109-201ENSMUST00000194076 746 ntBASIC32.03■■■□□ 2.72
Srebf2Q3U1N2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Srebf2Q3U1N2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.02■■■□□ 2.72
Srebf2Q3U1N2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Srebf2Q3U1N2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Srebf2Q3U1N2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.94■■■□□ 2.7
Srebf2Q3U1N2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Srebf2Q3U1N2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.85■■■□□ 2.69
Srebf2Q3U1N2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Srebf2Q3U1N2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Srebf2Q3U1N2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.72■■■□□ 2.67
Srebf2Q3U1N2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.71■■■□□ 2.67
Srebf2Q3U1N2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Srebf2Q3U1N2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Srebf2Q3U1N2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Srebf2Q3U1N2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.64■■■□□ 2.66
Srebf2Q3U1N2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Srebf2Q3U1N2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Srebf2Q3U1N2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Srebf2Q3U1N2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Srebf2Q3U1N2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Srebf2Q3U1N2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.46■■■□□ 2.63
Srebf2Q3U1N2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Srebf2Q3U1N2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Srebf2Q3U1N2 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.4■■■□□ 2.62
Srebf2Q3U1N2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Srebf2Q3U1N2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Srebf2Q3U1N2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.29■■■□□ 2.6
Srebf2Q3U1N2 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.28■■■□□ 2.6
Srebf2Q3U1N2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Srebf2Q3U1N2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.21■■■□□ 2.59
Srebf2Q3U1N2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.19■■■□□ 2.58
Srebf2Q3U1N2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Srebf2Q3U1N2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms