RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Gm9048A0A1W2P7H4 802 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 A0A1W2P7Z8 802 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gm9046A0A1W2P855 802 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Nt5c1aA3KFX0 365 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gm8871F7AXK2 190 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 4933402N22RikF7D1B3 190 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 DgkaO88673 730 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ercc3P49135 783 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 DmwdQ08274 665 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Perm1Q149B8 807 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Tespa1Q3U132 458 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Lrrfip1Q3UZ39 729 aaKnown RBP4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ehmt1Q5DW34 1296 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Kctd1Q5M956 257 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Samhd1Q60710 627 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Fscn1Q61553 493 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Znf507Q6ZPY5 941 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Zbed4Q80WQ9 1168 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Crb2Q80YA8 1282 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Znf618Q80YY7 953 aaKnown RBP4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 BC048507Q80ZS7 89 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 1700001K19RikQ80ZT1 219 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ubr7Q8BU04 425 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gpr152Q8BXS7 511 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Stac3Q8BZ71 360 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Kctd12bQ8C7J6 292 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Calhm6Q8C9E8 313 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ttc23Q8CHY7 488 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 DnerQ8JZM4 737 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Bst2Q8R2Q8 172 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Zkscan3Q91VW9 553 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Rab30Q923S9 203 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Rbm43Q99J64 343 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 PdhbQ9D051 359 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gfra4Q9JJT2 260 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Cdc42ep5Q9Z0X0 150 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Rp1l1Q8CGM2 1859 aa4.95□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Slc6a21A0A1B0GSD2 748 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ripor3A1L3T7 938 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Nmt2O70311 529 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Syn1O88935 706 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Nfkb1P25799 971 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Znf800Q0VEE6 662 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Phactr4Q501J7 694 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Myo19Q5SV80 963 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Etaa1Q5SVT3 877 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Tbc1d1Q60949 1255 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Kpna1Q60960 538 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Vps72Q62481 368 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Wnt8aQ64527 354 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 WaplQ65Z40 1200 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Swap70Q6A028 585 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ppp2r5aQ6PD03 486 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Prr5Q812A5 387 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Fbxo46Q8BG80 603 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pnma2Q8BHK0 365 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Clba1Q8BHN9 321 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Dusp15Q8R4V2 235 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 DaglbQ91WC9 669 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Mtmr4Q91XS1 1190 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Rdm1Q9CQK3 281 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Cep72Q9D3R3 646 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Tmprss6Q9DBI0 811 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 PalmdQ9JHU2 551 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 AatfQ9JKX4 526 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Rev3lQ61493 3122 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Vps13aQ5H8C4 3166 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Mmrn2A6H6E2 943 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pcdhb9E9Q5G2 828 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Terf2O35144 541 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ptch2O35595 1182 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Myl3P09542 204 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 LorP18165 486 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Cst8P32766 142 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Sycp3P70281 254 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Smad5P97454 465 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Sox9Q04887 507 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 March9Q3TZ87 348 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Krt77Q6IFZ6 572 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Usp50Q6P8X6 390 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Nrde2Q80XC6 1172 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Zdhhc15Q8BGJ0 337 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Zhx2Q8C0C0 836 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Rbm34Q8C5L7 375 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Spice1Q8C804 860 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ephb1Q8CBF3 984 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 MafaQ8CF90 359 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Epn2Q8CHU3 595 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Il17rcQ8K4C2 698 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pcdhb10Q91VE5 797 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Atp5c1Q91VR2 298 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 MutyhQ99P21 515 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Dis3Q9CSH3 958 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Creld2Q9CYA0 350 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Znf524Q9D0B1 321 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pus10Q9D3U0 527 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Fam166aQ9D4K5 319 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Nif3l1Q9EQ80 376 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Acox2Q9QXD1 681 aa4.94□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Foxe3Q9QY14 288 aa4.94□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms