Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm25239-201ENSMUST00000174915 86 ntBASIC39.86■■■■□ 3.97
Ptch2O35595 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
Ptch2O35595 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Ptch2O35595 Gm15042-201ENSMUST00000120212 883 ntBASIC34.68■■■■□ 3.14
Ptch2O35595 Gm24109-201ENSMUST00000175489 103 ntBASIC34.63■■■■□ 3.13
Ptch2O35595 Gm15045-201ENSMUST00000117359 883 ntBASIC33.96■■■■□ 3.03
Ptch2O35595 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Ptch2O35595 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Ptch2O35595 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Ptch2O35595 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Ptch2O35595 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Ptch2O35595 Gm23366-201ENSMUST00000175022 89 ntBASIC33.2■■■□□ 2.91
Ptch2O35595 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ptch2O35595 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
Ptch2O35595 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ptch2O35595 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.35■■■□□ 2.77
Ptch2O35595 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.13■■■□□ 2.73
Ptch2O35595 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ptch2O35595 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Ptch2O35595 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.94■■■□□ 2.7
Ptch2O35595 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ptch2O35595 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.92■■■□□ 2.7
Ptch2O35595 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ptch2O35595 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ptch2O35595 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ptch2O35595 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ptch2O35595 Gm25238-201ENSMUST00000174914 89 ntBASIC31.54■■■□□ 2.64
Ptch2O35595 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ptch2O35595 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ptch2O35595 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ptch2O35595 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ptch2O35595 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.39■■■□□ 2.62
Ptch2O35595 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.25■■■□□ 2.59
Ptch2O35595 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ptch2O35595 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ptch2O35595 Psd-208ENSMUST00000224556 2034 ntBASIC31.04■■■□□ 2.56
Ptch2O35595 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ptch2O35595 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
Ptch2O35595 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ptch2O35595 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.61■■■□□ 2.49
Ptch2O35595 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.61■■■□□ 2.49
Ptch2O35595 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ptch2O35595 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ptch2O35595 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
Ptch2O35595 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.39■■■□□ 2.46
Ptch2O35595 Gm27325-201ENSMUST00000175467 74 ntBASIC30.39■■■□□ 2.46
Ptch2O35595 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ptch2O35595 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.23■■■□□ 2.43
Ptch2O35595 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ptch2O35595 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ptch2O35595 Gm25262-201ENSMUST00000174934 133 ntBASIC30.16■■■□□ 2.42
Ptch2O35595 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ptch2O35595 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.98■■■□□ 2.39
Ptch2O35595 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ptch2O35595 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.95■■■□□ 2.39
Ptch2O35595 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ptch2O35595 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ptch2O35595 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.9■■■□□ 2.38
Ptch2O35595 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Ptch2O35595 Rab21-202ENSMUST00000218831 843 ntBASIC29.87■■■□□ 2.37
Ptch2O35595 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.79■■■□□ 2.36
Ptch2O35595 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Ptch2O35595 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ptch2O35595 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Ptch2O35595 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.64■■■□□ 2.34
Ptch2O35595 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.61■■■□□ 2.33
Ptch2O35595 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.61■■■□□ 2.33
Ptch2O35595 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Ptch2O35595 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.58■■■□□ 2.33
Ptch2O35595 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ptch2O35595 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ptch2O35595 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ptch2O35595 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.48■■■□□ 2.31
Ptch2O35595 Gm26115-201ENSMUST00000175605 87 ntBASIC29.45■■■□□ 2.31
Ptch2O35595 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ptch2O35595 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ptch2O35595 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Ptch2O35595 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ptch2O35595 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ptch2O35595 Gm8109-201ENSMUST00000194076 746 ntBASIC29.36■■■□□ 2.29
Ptch2O35595 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ptch2O35595 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ptch2O35595 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ptch2O35595 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Ptch2O35595 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ptch2O35595 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ptch2O35595 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.18■■■□□ 2.26
Ptch2O35595 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ptch2O35595 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ptch2O35595 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptch2O35595 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptch2O35595 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.14■■■□□ 2.26
Ptch2O35595 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.14■■■□□ 2.26
Ptch2O35595 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ptch2O35595 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ptch2O35595 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.07■■■□□ 2.24
Ptch2O35595 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ptch2O35595 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.96■■■□□ 2.23
Ptch2O35595 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.93■■■□□ 2.22
Ptch2O35595 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.92■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms