RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Ppp2r5bQ6PD28 497 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 NostrinQ6WKZ7 506 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Kcnk12Q76M80 430 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Q7TT23 1179 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Zcchc18Q8VD24 393 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Cstf1Q99LC2 431 aaKnown RBP12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Lamtor5Q9D1L9 91 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Clec3aQ9EPW4 196 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Ern1Q9EQY0 977 aa12.85□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Mamdc4A2AJA7 1228 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Ttll8A4Q9F1 832 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 MipepA6H611 711 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Gria2P23819 883 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Mcm3P25206 812 aaKnown RBP12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Rab23P35288 237 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 GabpaQ00422 454 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Cdca2Q14B71 982 aaKnown RBP12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Phactr4Q501J7 694 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 NfkbibQ60778 359 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Krt40Q6IFX3 439 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Zscan4cQ80VJ6 506 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Gprc5aQ8BHL4 356 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Znf592Q8BHZ4 1262 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Olfm5Q8BU90 496 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Yipf4Q8C407 246 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Stbd1Q8C7E7 338 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Polr2bQ8CFI7 1174 aaKnown RBP12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Slc8b1Q925Q3 585 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Foxp3Q99JB6 429 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 TfebQ9R210 475 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Tenm4Q3UHK6 2771 aa12.84□□□□□ -0.35
Hmgb1-202ENSMUST00000093196 Muc2Q80Z19 2680 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Adh6bA0A1D5RMB0 384 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Mroh5E9PUJ8 762 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ctnnal1O88327 731 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 GsnP13020 780 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ephb2P54763 986 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Timm10P62073 90 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Gas1Q01721 343 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ncbp1Q3UYV9 790 aaKnown RBP12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Kpna1Q60960 538 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Laptm4aQ60961 233 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Srsf1Q6PDM2 248 aaKnown RBP12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ece2Q80Z60 881 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 SucoQ8C341 1250 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 AslQ91YI0 464 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 PgcQ9D7R7 392 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Slc25a19Q9DAM5 318 aa12.83□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 9530053A07RikE9PVG8 2581 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Prss40A6H6T1 365 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Nolc1E9Q5C9 702 aaKnown RBP12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Cd46O88174 365 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Lin7bO88951 207 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Mybl2P48972 704 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Sash1P59808 1230 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Tmem173Q3TBT3 378 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Esyt2Q3TZZ7 845 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Dmc1Q61880 340 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Mical2Q8BML1 960 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Fez1Q8K0X8 392 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Kiss1rQ91V45 396 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Lrrfip2Q91WK0 415 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Chit1Q9D7Q1 464 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 TheglQ9DA15 459 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ift22Q9DAI2 185 aa12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Hic2Q9JLZ6 619 aaKnown RBP12.82□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ankrd50F7BE84 1390 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Dynll1P63168 89 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ccl7Q03366 97 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 MyrflQ3UN70 904 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Jade1Q6ZPI0 834 aaKnown RBP12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 ItpkcQ7TS72 678 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Adck5Q80V03 582 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 CslQ80X68 466 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 PolrmtQ8BKF1 1207 aaKnown RBP12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 PdhxQ8BKZ9 501 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Lsm14bQ8CGC4 385 aaKnown RBP12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 FbrsQ8R089 466 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Vsx1Q91V10 363 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 YarsQ91WQ3 528 aaKnown RBP12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Gdpd3Q99LY2 330 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 LctF8VPT3 1931 aa12.81□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Pwwp2bE9Q9M8 600 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 RxrbP28704 520 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Rin3P59729 980 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ano9P86044 747 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Trappc3lQ4KL14 181 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ppm1gQ61074 542 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Nlrp9aQ66X03 949 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Galnt6Q8C7U7 622 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Mroh6V9GX81 722 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Tmem131O70472 1877 aa12.8□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Pi4kaE9Q3L2 2105 aa12.79□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Auts2A0A087WPF7 1261 aa12.79□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Gm8871F7AXK2 190 aa12.79□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 4933402N22RikF7D1B3 190 aa12.79□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Dnajb6O54946 365 aa12.79□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Lnx1O70263 728 aa12.79□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Rangap1P46061 589 aaKnown RBP12.79□□□□□ -0.36
Hmgb1-202ENSMUST00000093196 Ercc3P49135 783 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms