Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm25239-201ENSMUST00000174915 86 ntBASIC39.22■■■■□ 3.87
Vsx1Q91V10 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
Vsx1Q91V10 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Vsx1Q91V10 Gm24109-201ENSMUST00000175489 103 ntBASIC34.27■■■■□ 3.08
Vsx1Q91V10 Gm15042-201ENSMUST00000120212 883 ntBASIC33.73■■■□□ 2.99
Vsx1Q91V10 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Vsx1Q91V10 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Vsx1Q91V10 Gm15045-201ENSMUST00000117359 883 ntBASIC32.91■■■□□ 2.86
Vsx1Q91V10 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Vsx1Q91V10 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Vsx1Q91V10 Gm23366-201ENSMUST00000175022 89 ntBASIC32.64■■■□□ 2.82
Vsx1Q91V10 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.16■■■□□ 2.74
Vsx1Q91V10 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
Vsx1Q91V10 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.83■■■□□ 2.69
Vsx1Q91V10 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Vsx1Q91V10 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Vsx1Q91V10 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Vsx1Q91V10 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Vsx1Q91V10 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Vsx1Q91V10 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Vsx1Q91V10 Gm25238-201ENSMUST00000174914 89 ntBASIC31.15■■■□□ 2.58
Vsx1Q91V10 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.11■■■□□ 2.57
Vsx1Q91V10 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Vsx1Q91V10 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Vsx1Q91V10 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Vsx1Q91V10 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Vsx1Q91V10 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
Vsx1Q91V10 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Vsx1Q91V10 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
Vsx1Q91V10 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Vsx1Q91V10 Gm25262-201ENSMUST00000174934 133 ntBASIC30.04■■■□□ 2.4
Vsx1Q91V10 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Vsx1Q91V10 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.99■■■□□ 2.39
Vsx1Q91V10 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.97■■■□□ 2.39
Vsx1Q91V10 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.94■■■□□ 2.38
Vsx1Q91V10 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
Vsx1Q91V10 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Vsx1Q91V10 Psd-208ENSMUST00000224556 2034 ntBASIC29.73■■■□□ 2.35
Vsx1Q91V10 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Vsx1Q91V10 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.65■■■□□ 2.34
Vsx1Q91V10 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Vsx1Q91V10 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.61■■■□□ 2.33
Vsx1Q91V10 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.58■■■□□ 2.33
Vsx1Q91V10 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Vsx1Q91V10 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.55■■■□□ 2.32
Vsx1Q91V10 Gm26115-201ENSMUST00000175605 87 ntBASIC29.52■■■□□ 2.32
Vsx1Q91V10 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.5■■■□□ 2.31
Vsx1Q91V10 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Vsx1Q91V10 Gm27325-201ENSMUST00000175467 74 ntBASIC29.45■■■□□ 2.31
Vsx1Q91V10 Gm8109-201ENSMUST00000194076 746 ntBASIC29.34■■■□□ 2.29
Vsx1Q91V10 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Vsx1Q91V10 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Vsx1Q91V10 Rab21-202ENSMUST00000218831 843 ntBASIC29.26■■■□□ 2.27
Vsx1Q91V10 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.25■■■□□ 2.27
Vsx1Q91V10 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Vsx1Q91V10 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Vsx1Q91V10 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Vsx1Q91V10 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Vsx1Q91V10 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.97■■■□□ 2.23
Vsx1Q91V10 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Vsx1Q91V10 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Vsx1Q91V10 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Vsx1Q91V10 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Vsx1Q91V10 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Vsx1Q91V10 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Vsx1Q91V10 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.75■■■□□ 2.19
Vsx1Q91V10 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.69■■■□□ 2.18
Vsx1Q91V10 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Vsx1Q91V10 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.64■■■□□ 2.18
Vsx1Q91V10 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.63■■■□□ 2.17
Vsx1Q91V10 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Vsx1Q91V10 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Vsx1Q91V10 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Vsx1Q91V10 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Vsx1Q91V10 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Vsx1Q91V10 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Vsx1Q91V10 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.39■■■□□ 2.14
Vsx1Q91V10 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Vsx1Q91V10 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.37■■■□□ 2.13
Vsx1Q91V10 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Vsx1Q91V10 Gm24804-201ENSMUST00000174982 85 ntBASIC28.32■■■□□ 2.12
Vsx1Q91V10 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Vsx1Q91V10 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Vsx1Q91V10 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vsx1Q91V10 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Vsx1Q91V10 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.11■■■□□ 2.09
Vsx1Q91V10 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.09■■■□□ 2.09
Vsx1Q91V10 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
Vsx1Q91V10 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.05■■■□□ 2.08
Vsx1Q91V10 Gm27322-201ENSMUST00000184007 104 ntBASIC28.03■■■□□ 2.08
Vsx1Q91V10 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.03■■■□□ 2.08
Vsx1Q91V10 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.02■■■□□ 2.08
Vsx1Q91V10 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.99■■■□□ 2.07
Vsx1Q91V10 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Vsx1Q91V10 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Vsx1Q91V10 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Vsx1Q91V10 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.93■■■□□ 2.06
Vsx1Q91V10 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.92■■■□□ 2.06
Vsx1Q91V10 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.91■■■□□ 2.06
Vsx1Q91V10 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms